| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1417 |
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| Symbol | lpxB |
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| ID | 1220241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1516945 |
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| End bp | 1518117 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237795 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | NP_519538 |
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| Protein GI | 17546136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.903246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0685457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGCAGC CGCCCGCCGC GCCGGCCCGC CGCATCGGCA TGGCAGCCGG CGAGGCGTCC
GGCGACCTGC TGGCCTCGCT GCTGCTCAAG GGGCTGCATG CGCGGCTGCC GCGGGATGTC
GCCTACGAGG GCATCGGCGG CGCGCGCATG GCGGAGCAGG GCTTCGCATC GCATTGGCCG
ATGCACAAGC TGTCGGTCAA CGGTTATGTC GAGGTGCTCG GCCAGCTGCG CGAGATTCTC
GCCATCCGGC GCGAACTGAA GCAGAACCTG CTGGCCGATC CGCCGATGGC CTTCATCGGC
GTGGACGCCC CCGATTTCAA TTTCAACGTC GAGATCGCCA TGCGGCGCGC GGGCGTGCCG
GTGGTGCACT TCGTCAGCCC GTCGATCTGG GCATGGCGCG CCGGGCGCAT CAAGACGATC
GCGCGCGCGG TCGACCACAT CCTCTGCCTG TTCCCGTTCG AGCCTGAGAT CTACGCCAGG
GCCGGGATTC CAGCCACCTA CGTCGGCCAT CCGCTGGCCG ACGAGATTCC GCTGGAGCCG
GACGTGGAGG GCGCGCGCAG CCGTCTCGGA CTGCCGCTCG GCCGCAAGGT GGTGGCGGTG
CTGCCGGGCA GCCGCAACTC CGAGGTCAAG CTGCTCGGGC CGACGCTGTT CGCCGCGATG
GCGCGCATGC AGGCCGTCGA GCCGGACCTC GCCTTTGTGC TGCCGGCGGC CAACGCCATG
CTGCGCGAAC GGATCGACGC GATGCGCGCG GAGCACCCCG GCCTGCACCT GTGGGTGGTC
GACGGGCAGT CGCACGCCGC GATGGAAGCG GCCGACGTGA TCCTGCTCGC CAGCGGCACC
GCGACGTTGG AGGCCGCGCT GTACAAGAAG CCGATGGTGA TCACCTACAA GGTGCCCTGG
CTGACCGCGC AGATCATGAA GCGCAAGGGC TACCTGCCGT ACGTGGGCCT GCCGAACATC
CTGTCGGGCC GCTTTGTCGT GCCCGAACTG CTGCAGGACG ATGCGACACC CGAGGCGCTC
GCTCGCGAGA CGCTGCTGCA GCTCAGCGAC CACGCCAACG CGGCGTTCCT GCGCGAGCAC
TTCACGCAGA TGCACCTGAC GCTCAAGCAG AACATGGCCG ACATCGGCGC CCAGGTGGTG
GTGGACCTGC TGCGCGGCCG CGGCAAACTC TGA
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| Protein sequence | MTQPPAAPAR RIGMAAGEAS GDLLASLLLK GLHARLPRDV AYEGIGGARM AEQGFASHWP
MHKLSVNGYV EVLGQLREIL AIRRELKQNL LADPPMAFIG VDAPDFNFNV EIAMRRAGVP
VVHFVSPSIW AWRAGRIKTI ARAVDHILCL FPFEPEIYAR AGIPATYVGH PLADEIPLEP
DVEGARSRLG LPLGRKVVAV LPGSRNSEVK LLGPTLFAAM ARMQAVEPDL AFVLPAANAM
LRERIDAMRA EHPGLHLWVV DGQSHAAMEA ADVILLASGT ATLEAALYKK PMVITYKVPW
LTAQIMKRKG YLPYVGLPNI LSGRFVVPEL LQDDATPEAL ARETLLQLSD HANAAFLREH
FTQMHLTLKQ NMADIGAQVV VDLLRGRGKL
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