| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1416 |
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| Symbol | lpxA |
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| ID | 1220240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1516133 |
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| End bp | 1516948 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237794 |
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| Product | UDP-N-acetylglucosamine acyltransferase |
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| Protein accession | NP_519537 |
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| Protein GI | 17546135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
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| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.510107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.105185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAG TTCAGAAGAT TCACCCGACC GCGGTGATCG ACCCGCAGGC CGAACTGGCC
CCGGATGTCG AGGTCGGCGC CTTTACCGTG ATCGGCCCGA ATGTGCGCAT CGATTCGGGG
ACGCGCATCG GCCACCATAC CGTGGTCGAG GGCTACACCA CGCTGGGCCG CGACAACCAG
ATCGGCCACT TCGCGTCGGT GGGCGGGCGA CCGCAGGATA TGAAGTACCG CGACGAGCCG
ACCCGGCTCA TCGTCGGCGA CCGCAACACC ATCCGCGAAT TCACCACGAT CCATACCGGC
ACCGCGCAGG ATGTCGGCAT CACGTCCATC GGCGATGACA ACTGGATCAT GGCCTACGTG
CACATCGCGC ACGATTGCCG CATCGGCAAC CACACGGTGT TCTCCAGCAA CGCGCAGATC
GCCGGCCACG TGGAAGTGGG CGATTGGGCA ATCCTGGGCG GCATGTCGGG CGTGCACCAG
TTCGTGCGCA TCGGCGCGCA CGCGATGCTG GGCGGTGCCT CGGCGCTGGT GCAGGATGTG
CCGCCGTTCG TGATCGCCGC CAGCGACAAG GGCGGCAACA AGGCCGCGCC GCATGGCGTC
AACGTCGTGG GCCTGCAGCG CCGCGGCTTT TCGGCCGAGC AGATCGCCGG CCTGCGCCAG
GCCTACAAGC TGCTCTACAA GAGCGACCTG AGCTTCGACC AGGCCCAGGC CGAGATCGCC
GCGCAGGTCG CGCAGACCGA AGATGCCCCG AGCCGCGAGG CGCTGCGCAC CTTCGCCGAC
TTCATCGCCG CCACCAAGCG CGGCATCGTG CGTTGA
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| Protein sequence | MTQVQKIHPT AVIDPQAELA PDVEVGAFTV IGPNVRIDSG TRIGHHTVVE GYTTLGRDNQ
IGHFASVGGR PQDMKYRDEP TRLIVGDRNT IREFTTIHTG TAQDVGITSI GDDNWIMAYV
HIAHDCRIGN HTVFSSNAQI AGHVEVGDWA ILGGMSGVHQ FVRIGAHAML GGASALVQDV
PPFVIAASDK GGNKAAPHGV NVVGLQRRGF SAEQIAGLRQ AYKLLYKSDL SFDQAQAEIA
AQVAQTEDAP SREALRTFAD FIAATKRGIV R
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