Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1415 |
Symbol | fabZ |
ID | 1220239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1515642 |
End bp | 1516136 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637237793 |
Product | (3R)-hydroxymyristoyl-ACP dehydratase |
Protein accession | NP_519536 |
Protein GI | 17546134 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.146549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0955875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CCTCTGCCGC GACGACGAGC CTCGTCAGCG ATTTCAACAT CAAGAAGATT CTCGAACTGC TGCCGCACCG CTATCCGATG CTGCTGGTCG ATCGCGTGCT CGAGATGGAG CCGCGCAAGC GCATCAAGGC GATCAAGAAC GTCACCTTCA ACGAGCCGTT CTTCAACGGC CATTTCCCGG GCCACCCGGT GATGCCGGGC GTGCTGATGC TCGAAGCGCT GGCCCAGACC GCCGCGCTGC TGACCTTCGG CGAGTCCAAT CACAAGCGCC AGGAAAACCA GCTCTACCTG TTCGTCAGCA TCGATGGCGC GCGCTTCAAG CGCCAGGTCA CGCCGGGCGA TCAGCTGGTG CTGAACGCCG AGCTGCTGCG CTCCAAGAGC GGCATGTGGA AGTTCAAGGT GTTCGCGACC GTGGACGATG AAGTCGCGGC CGAGGCTGAG ATCATGTGTG CCGTGCGCGA AGACAAGTCC AAGGGCGACG CATGA
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Protein sequence | MTEPSAATTS LVSDFNIKKI LELLPHRYPM LLVDRVLEME PRKRIKAIKN VTFNEPFFNG HFPGHPVMPG VLMLEALAQT AALLTFGESN HKRQENQLYL FVSIDGARFK RQVTPGDQLV LNAELLRSKS GMWKFKVFAT VDDEVAAEAE IMCAVREDKS KGDA
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