Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1413 |
Symbol | |
ID | 1220237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1514010 |
End bp | 1514564 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637237791 |
Product | hypothetical protein |
Protein accession | NP_519534 |
Protein GI | 17546132 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.980965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.265022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAT CCATCATGAA ATCCACGCGC ATCACGTTGT CCCGCATGGG CGTGTCCGCT GCCTTCGCCG CGCTGGCCGC CGCCAGCTTC GCGCTGCCGG CCACCGCCCA GGAAGCCCGC ATCGCGGCTG TCAATTCCGA GCGCATCCTG CGCGACTCGC AGCCGGCCAA GGCCGCCCAG GCCAAGCTGG AAACCGAGTT CGCCAAGCGC GACCGTGAAC TGCAGGATAT GGCCGCCAAG CTCAAGGCGA TGTCGGACAA GCTGGACAAG GACACCGCCG TGCTGGCCGA TTCCGACCGC ACGCGCCGCC AGCGCGAGCT GGCCGACATG GACCGCGATT TCCAGCGCAA GCAGCGCGAG TTCCGTGAAG ACCTGAACCA GCGCCGCAAC GAAGAGTTGG CCGGCGTGCT CGAGCGCGCC AACCGCGTGA TCCGCCAGAT CGCCGAGCAG CGCAAGTACG ACCTGATCGT GCAGGAGGCG GTGTACGTGA ACCCGCGCAT CGACATCACC GACGAAGTGC TCAAGGCACT GAACGCCTCG CAATCGGCGA AATGA
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Protein sequence | MTASIMKSTR ITLSRMGVSA AFAALAAASF ALPATAQEAR IAAVNSERIL RDSQPAKAAQ AKLETEFAKR DRELQDMAAK LKAMSDKLDK DTAVLADSDR TRRQRELADM DRDFQRKQRE FREDLNQRRN EELAGVLERA NRVIRQIAEQ RKYDLIVQEA VYVNPRIDIT DEVLKALNAS QSAK
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