| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1411 |
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| Symbol | |
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| ID | 1220235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1510220 |
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| End bp | 1511608 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237789 |
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| Product | hypothetical protein |
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| Protein accession | NP_519532 |
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| Protein GI | 17546130 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.73492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGACCG TTTTAGCGTT TGTTTTCGCG ATCGCTGTTC TGATCGTCGT TCACGAACTG
GGGCACTACA GCGTTGCACG GTTGTGCGGC GTCAAGGTGC TGCGGTTCTC TGTCGGTTTC
GGCAAGGTGC TGTTCCGCCG TGTCGGGCGT GGTCCGGATC GCACCGAATG GACGCTCTGC
GCCATTCCGC TCGGCGGCTA CGTCAAGATG CTGGGCGAGA GCGCCCGCGA CCCTGAGCGG
GATCCGCCAA TTCCCCCCGA GGACCTGCCC CGTACCTTCG ATCACCAGCC GGTCTACAAG
CGTTTTGCCA TTGTGGCGGC CGGGCCGGTC TTCAATTTCC TGCTGGCGAT CGCGCTGTAT
GCGCTGCTGG CCTGGGTGGG GGCGCAGGAG CCGCTGCCCA TCCTCGGCGC ACCGCCGCCC
GGCAGCATCG CCGCGCAGGC TGATCTGCGC GCCAAGGATC GCGTGGTCGC GGTCGGCACT
GACGAGGAGG CGCCGACCCC GGTCCGGGCC TGGAGCGACG TGCGCATGCG CCTGTATGAA
GCCGGCATCG GCGGGCGCGA CGCCATCGTC CAGGTGCGCG GTGCCGACGG CGCGGAGCGG
ACCGTGCGCC TGCGGGAGCT GCCCAGCGCC GCCCGCTCGC CCCAGGTCGA CGTGATCGAG
CAGGTCGGGC TGCGCCTGCT GGGCGGTCCG GTCACCATTG CCGAGGTTCT GCCCGGCAGC
GCCGGCGAGC GCGCCGGACT GCGTCGCGGC GACCAGATCG TCCGCTTCGC CGGCCAACCC
GCCGACCAGG CTTCCGACCT GATCCGCTGG ATCCGCGCCA TGCCCGAGCA GAACGCCTCG
ATCGACATCC TGCGCGATGG CCTGCCGATG ACACTCCCGG TGCGCCTGGG CGCCGACGCC
GATTCCGCGA ATCCGGGCGG GCCGAAGCTC GGCAAGCTCG GCGCGCAGCT CTCGCAGCAT
GTGGAAACCG AACTGATCCG CGACGAGCCG GTCCATGCAC TGGGGCATGC GATGCGTGAG
GTCTGGCGGA CCTCGATGCT GTCGCTGAAG GTGCTGGGCA AGATGATCGT GGGGCAGGCG
TCGCTGCAGA ACCTGAGCGG TCCGATCACC GTCGCCGACT TCGCGGGCAA GGCCGCGAGC
CTCGGCTGGC AGTCCTTCGT CGCCTTCCTG GCCTTGATCA GCGTGAGTCT CGGGGTGCTG
AACTTGTTGC CCGTTCCGGT ATTGGATGGG GGGCATTTGC TGTATTATTG CGTGGAATTT
TTGACAGGCA AGCCTGTGCC GGAATCCTGG CAAGCGGTAC TTCAAAAGAT CGGCATCGCC
TGCATCCTGC TTCTCACTTC GCTCGCCTTG TACAACGACT TGAGCCGGCT GTTCCTGGCT
CACGGCTAG
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| Protein sequence | MLTVLAFVFA IAVLIVVHEL GHYSVARLCG VKVLRFSVGF GKVLFRRVGR GPDRTEWTLC
AIPLGGYVKM LGESARDPER DPPIPPEDLP RTFDHQPVYK RFAIVAAGPV FNFLLAIALY
ALLAWVGAQE PLPILGAPPP GSIAAQADLR AKDRVVAVGT DEEAPTPVRA WSDVRMRLYE
AGIGGRDAIV QVRGADGAER TVRLRELPSA ARSPQVDVIE QVGLRLLGGP VTIAEVLPGS
AGERAGLRRG DQIVRFAGQP ADQASDLIRW IRAMPEQNAS IDILRDGLPM TLPVRLGADA
DSANPGGPKL GKLGAQLSQH VETELIRDEP VHALGHAMRE VWRTSMLSLK VLGKMIVGQA
SLQNLSGPIT VADFAGKAAS LGWQSFVAFL ALISVSLGVL NLLPVPVLDG GHLLYYCVEF
LTGKPVPESW QAVLQKIGIA CILLLTSLAL YNDLSRLFLA HG
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