| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1410 |
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| Symbol | dxr |
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| ID | 1220234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1508933 |
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| End bp | 1510114 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237788 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | NP_519531 |
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| Protein GI | 17546129 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.989203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA TTACCGTTCT TGGCGCCACC GGCTCCATCG GCGACAGCAC GCTCGACGTG
GTGCGCCGCC ATCCCGACCG TTACCGCGTG TTCGCACTGA CCGCCAACAC GCAGGTCGAT
AAGCTTGCCG CGCTGTGCCG CGTGTTCCGT CCGGCGATGG CGGTGGTCGG CTCGGCCACC
GCGGCCGAGG TGCTGCGGGA CCAGCTCGGC GCGGAGGCCA CCGGCATCGA CATCCGCTTC
GGCCCCGAGG CGCTGGAAGA GGCCGCCGCC CACCCCGATT GCGATGCCGT GATGGCCGCC
ATCGTCGGCG CGGCCGGCCT GCGCCCGACG CTGGCGGCCG TGCGCGCGGG CAAGCGTGTG
CTGCTGGCCA ACAAGGAAGC GCTGGTGATG TCCGGCGCGC TCTTCATGGA CGCGGTGCGC
CAGCATGGCG CCACCGTGCT GCCGATCGAC AGCGAGCATA ACGCCATCTT CCAGTGCCTG
CCCCAGCAGC GTCCGAGCTT CGGGCACGGT GTGGCGCGCA TCGTGCTGAC GGCGTCGGGC
GGCCCGTTCC GCACGCGCGC CGTCGAGACG CTGGCCGAGG TCACGCCCGA TCAGGCCTGC
GCCCATCCGA ACTGGGTGAT GGGCCGCAAG ATTTCCGTCG ACTCCGCCAC CATGATGAAC
AAGGGGCTGG AGGTGATCGA GGCGCACTGG CTGTTCAACG TGCCGGTCGA GCGGCTCGAG
GTGCTGATCC ACCCGCAGAG CGTGATCCAT TCGATGGTCG CTTACGATGA CGGTTCGGTC
CTGGCGCAAC TGGGCAACCC CGACATGCGG ACGCCGATCG CCTACGGGCT TGCGTACCCC
GAGCGCATCG AGGCCGGCGT GCCGCTGCTG GATCTGGCCG CGACCGGCAC GCTTGCGTTC
GAAGCGCCCG ATCTGCACCG CTTCCCGTGT CTGGCCCTGG CTTTCGACGC ACTGCGCGCC
GGCGGCACGG CGCCTGCGGT GCTGAATGCG GCCAACGAGG TGGCGGTCGA GGCATTTTTG
CAGCGCCGTA TCCGCTTCAC CGAGATTGCC GCGGTGGTGG GCGACACGCT GGCGCGCACC
GCCATCGGGC CGGCGGATTC GCTGGACACG GTGTTTGCCG CCGATGCGCA GGCGCGCCGC
CGCGCCGAGC ACTATATCGC TGCCTCGTGC CTGCAGTCGT GA
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| Protein sequence | MMRITVLGAT GSIGDSTLDV VRRHPDRYRV FALTANTQVD KLAALCRVFR PAMAVVGSAT
AAEVLRDQLG AEATGIDIRF GPEALEEAAA HPDCDAVMAA IVGAAGLRPT LAAVRAGKRV
LLANKEALVM SGALFMDAVR QHGATVLPID SEHNAIFQCL PQQRPSFGHG VARIVLTASG
GPFRTRAVET LAEVTPDQAC AHPNWVMGRK ISVDSATMMN KGLEVIEAHW LFNVPVERLE
VLIHPQSVIH SMVAYDDGSV LAQLGNPDMR TPIAYGLAYP ERIEAGVPLL DLAATGTLAF
EAPDLHRFPC LALAFDALRA GGTAPAVLNA ANEVAVEAFL QRRIRFTEIA AVVGDTLART
AIGPADSLDT VFAADAQARR RAEHYIAASC LQS
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