| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1408 |
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| Symbol | uppS |
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| ID | 1220232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1507323 |
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| End bp | 1508099 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237786 |
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| Product | undecaprenyl pyrophosphate synthetase protein |
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| Protein accession | NP_519529 |
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| Protein GI | 17546127 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATATCA GCTCGACACT GGCGGTGCCT GACACCGCCG ATACGCCACA CCACGTTGCC
ATCATCATGG ATGGCAATGG CCGCTGGGCC ACCGAACGCC ACCTCCCGCG CATGGCAGGG
CACAGTCGTG GCCTCGATGC CGTGCGTGCC GCGGTCCAGG CCGCAGACCA CCGTGGCGTG
CGCTACCTGA CGCTGTTCGC GTTCAGTTCG GAGAACTGGC GCCGTCCGGC CGAGGAAATC
TCCTTCCTGA TGAAGCTGTT CATGACGGCT CTGCGGCGCG AGGTGAGCAA GCTGAATGAC
AGCGGCATCC GCCTGCGCGT GGTGGGTGAC CTGAGTGCGT TCAGTCCGCG TATCCAGCTG
ATGATCCGCG AGGCGGAAGC CAAGACGGCG ACCAACCCCG GGCTCACTGT CACCATCGCC
GCCAACTACG GCGGCCGCTG GGACATCCTG CAGGCCATGC GCGCGCTGGT GGCCGATCAG
CCCGACATCG CGCCCGAAGC CATCACCGAA GAGGCGCTGT CGCCGTATAT GGCGCTGGCG
TATGCGTCGG AGCCGGACCT GTTCATCCGC ACCGGCGGCG AGCAGCGCAT CAGCAATTTC
ATGCTGTGGC AGCTCGCCTA TTCCGAGCTC TACTTCACCG AACGCTACTG GCCCGATTTC
GACGCTGCGG AGATGGATCG CGCCTTTGCC TGGTATCGCA ACCGCGAGCG GCGCTTTGGC
CGTACCAGCG CGCAGCTGGA ACCCGGTACT GCCCCCGCAC TGTCGGCTGG AGCCTGA
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| Protein sequence | MHISSTLAVP DTADTPHHVA IIMDGNGRWA TERHLPRMAG HSRGLDAVRA AVQAADHRGV
RYLTLFAFSS ENWRRPAEEI SFLMKLFMTA LRREVSKLND SGIRLRVVGD LSAFSPRIQL
MIREAEAKTA TNPGLTVTIA ANYGGRWDIL QAMRALVADQ PDIAPEAITE EALSPYMALA
YASEPDLFIR TGGEQRISNF MLWQLAYSEL YFTERYWPDF DAAEMDRAFA WYRNRERRFG
RTSAQLEPGT APALSAGA
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