| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1405 |
|---|
| Symbol | tsf |
|---|
| ID | 1220229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1504644 |
|---|
| End bp | 1505522 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637237783 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | NP_519526 |
|---|
| Protein GI | 161621733 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAA TTACCGCAAG CATGGTGGCA GAACTGCGCG CGAAGACCGA CGCGCCGATG
ATGGAATGCA AGAAGGCCCT GACCGAAGCC GAAGGCAATA TGGAAAAGGC CGAAGAGATC
CTGCGCGTGA AGCTGGGCAA CAAGGCCGGC AAGGCCGCGG CCCGCATCAC CGCTGAAGGC
GTGATCGCTT CGTTCATCGA CGGCACCATC GGCGCCCTGG TCGAGCTGAA CTGCGAAACC
GACTTCGTGT CGCGCAACGA CGATTTCCTG GGCTTCGCCA ACGAGATCGC CAAGTTGATC
GCCACGCAGA ACCCGGCGGA CGTCGCTGCC CTGTCGGCCC TGTCGATCGG CGACGAAACC
GTGGAAGCCG TGCGCACTCG CCTGATCGGC AAGATCGGCG AGAACATGAC GATCCGCCGT
TTCCAGCGCT TCGAGGGTAC CAAGCTGGCT TCGTACCTGC ACGGCACCCG CATTGGTGTG
ATGGTGGCGT TCGACGGTGA CGAAGTTGCC GCCAAGGACG TGGCGATGCA CGCCGCGGCC
ATGAAGCCGG TTGCACTGTC GTCGGACGAA GTGCCGGCCG AGCTGATCGC CAAGGAGCGC
AGCATCGCCG AGCAGAAGGC TGCCGAATCG GGCAAGCCGG CCGAGATCGT TGCCAAGATG
GTGGAAGGCA GCGTGCAGAA GTACCTGAAG GAAGTCTCGC TGCTGAACCA GCCGTTCGTG
AAGAACGACA AGCAGACCGT CGAGCAGATG CTCAAGGCCG CCAACACGAC CGTGAAGGGC
TTCACGCTGT TCGTGGTGGG CGAGGGCATC GAGAAAAAGC AGGACGACTT CGCCGCCGAA
GTGGCCGCCC AGGTGGCTGC CGCCAAGCAG CAGGCGTAA
|
|---|
| Protein sequence | MAAITASMVA ELRAKTDAPM MECKKALTEA EGNMEKAEEI LRVKLGNKAG KAAARITAEG
VIASFIDGTI GALVELNCET DFVSRNDDFL GFANEIAKLI ATQNPADVAA LSALSIGDET
VEAVRTRLIG KIGENMTIRR FQRFEGTKLA SYLHGTRIGV MVAFDGDEVA AKDVAMHAAA
MKPVALSSDE VPAELIAKER SIAEQKAAES GKPAEIVAKM VEGSVQKYLK EVSLLNQPFV
KNDKQTVEQM LKAANTTVKG FTLFVVGEGI EKKQDDFAAE VAAQVAAAKQ QA
|
|---|
| |