| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1401 |
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| Symbol | |
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| ID | 1220225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1497887 |
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| End bp | 1499782 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637237779 |
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| Product | hypothetical protein |
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| Protein accession | NP_519522 |
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| Protein GI | 17546120 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT CCGACGATTT CCCCGGCGAC GACACCAAGC GCTCCGCCAG CGACCCCACG
CAGCGGGCCA CCCGCCCGGG CAAGCGCGCC ACGCTCGGCG TGCGCCGCGA CGACACGGGC
AACCCGGTGC GCACCACCGG CAAGCCGCTG CGCGCCTCCG ACCTGAACCG CGACCGCCAG
CCGCTGCGCC CGTCGCAACG CCGGCCCAAG CCGCAGGAAG GCGACGCCAA GCGGCCCGCC
CGAGCGCGCC GCGACGACGA CAGCCAGCCG CCGCGCGAGG CCAAGCCGCG CCGCATGCAG
GGGGACCGCC CGCCGCGCCG GTTCGAGGAC CGTCCGCCGC GTCGATTCGA TGACGAACGT
CCGCCGCGCA AGTTCGGCGA CGATCAACGT CCGCCCCGTC GCTTCGGCGA TGAGCGGCCG
CCTCGCCGGT TCGAGGACCG TCCTCCGCGC CGATTCGATG ACGAACGTCC GCCGCGCAAG
TTCGGCGACG ATCAACGTCC GCCCCGTCGC TTCGGCGATG AGCAGCCGCC TCGCCGGTTC
GAGGACCGTC CTCCGCGCCG ATTCGATGAC GAGCGGCCGC CGCGCAAGTT CGGCGACGAT
CAACGTCCGC CGCGTCGGTT TGACGATGAG CGGCCGCCTC GCCGGTTCGA GGACCGTCCG
CCGCGCCGAT TCGATGACGA GCGGCCGCCG CGCAAGTTCG GCGACGATCA ACGTCCGCCC
CGTCGCTTCG GCGATGAGCG ACCACCCCGC CGGTTCGAGG ACCGTCCGCC GCGCCGATTC
GATGACGAAC GGCCGCCGCG CAGGTCCGGC GACGATCAAC GTCCGCCCCG TCGCTTCGGC
GACGAGCGGC CTCCACGCCG TTTCGAGGAC CGCCCACCGC GCCGGTTCGA TGACGAACGG
CCACCGCGCA GGTCCGGCGA CGATCAACGC CCGCCCCGTC GCTTCGAGGA CCGTCCTCCG
CGCCGGTTCG ATGACGAACG GCCGCCGCGC AGGTCCGGTG ATGATCAGCG CCCTCCGCGC
CGCTTCGAGG ACCGTCCGGC CCGCGCGCCG CGCCCCGAAC GCGATGAGCG CGCGCCCCAA
CGCGAGGCGG CACACACGCC CGGTTCGGCA CCCCTGGCGG AATCGTCGGG CCTGGTGCGG
CTGTCCAAGC GCATGTCCGA GCTGGGCCTG TGCTCGCGCC GCGAGGCGGA CGAGTGGATT
CCGCGCGGCT GGGTGCTGGT GGACGGCGAG CCCGTCACCG AACTGGGTTC GCGCGTGCGA
CCGGATGCCG AGATCGAGAT CCTCCCGGCC GCGCGCTCCG AACAGGGCGA GCGCGTGACG
GTGCTGCTGC ACAAGCCCGT GGGCTATGTG TCGGGCCAGG CGGAAGACGG CTACGAGCCC
GCCGCCGCGC TGTTCACGGC GGAGAACCAG TGGGAGGAGG ATCCGACCCG CAAGCATTTC
GCCGCCTGGC AGCACAAGGG CCTGGCGCCG GCCGGCCGGC TGGACATCGA CTCCACCGGC
CTGCTGGTGC TGACGCAGGA CGGCCGCGTG GCGCGCCACC TGATCGGCGA AGACTCGACC
GTCGAGAAGG AATACCTGGT GCGCGTGGTG TGGAATGCGC CGCAGGGCCC CGTCGAGCAC
GACATCTCCA AGGTCTTCCC CGAAGACCTG CTGGAGATGC TGCGCCACGG CCTGTCGCTG
GACGGCGAGG CGCTCAAGCC CGCCAAGGTC AGCTGGCAGA ACGAAGAGCA GCTGCGCTTC
GTGCTGCGCG AAGGCAAGAA GCGCCAGATC CGCCGGATGT GCGAGCAGGT CGGCCTGGAG
GTGGTGGGCC TCAAGCGCAT CCGTATGGGC AGCGTCGTGC TGGGCGACCT GCCGGTGGGC
AAGTGGCGCT TCCTGGGCCG CTTCGAGAAG TTCTGA
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| Protein sequence | MTDSDDFPGD DTKRSASDPT QRATRPGKRA TLGVRRDDTG NPVRTTGKPL RASDLNRDRQ
PLRPSQRRPK PQEGDAKRPA RARRDDDSQP PREAKPRRMQ GDRPPRRFED RPPRRFDDER
PPRKFGDDQR PPRRFGDERP PRRFEDRPPR RFDDERPPRK FGDDQRPPRR FGDEQPPRRF
EDRPPRRFDD ERPPRKFGDD QRPPRRFDDE RPPRRFEDRP PRRFDDERPP RKFGDDQRPP
RRFGDERPPR RFEDRPPRRF DDERPPRRSG DDQRPPRRFG DERPPRRFED RPPRRFDDER
PPRRSGDDQR PPRRFEDRPP RRFDDERPPR RSGDDQRPPR RFEDRPARAP RPERDERAPQ
REAAHTPGSA PLAESSGLVR LSKRMSELGL CSRREADEWI PRGWVLVDGE PVTELGSRVR
PDAEIEILPA ARSEQGERVT VLLHKPVGYV SGQAEDGYEP AAALFTAENQ WEEDPTRKHF
AAWQHKGLAP AGRLDIDSTG LLVLTQDGRV ARHLIGEDST VEKEYLVRVV WNAPQGPVEH
DISKVFPEDL LEMLRHGLSL DGEALKPAKV SWQNEEQLRF VLREGKKRQI RRMCEQVGLE
VVGLKRIRMG SVVLGDLPVG KWRFLGRFEK F
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