Gene RSc1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1388 
Symbol 
ID1220212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1480946 
End bp1481860 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID637237766 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionNP_519509 
Protein GI17546107 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCCGA ACATGACCGT CCCTGCCCTA CCCGCCTCCC ATCCGTTCAC CACGATGCGC 
GACCTGCTGC GCTATGCCGT GTCGCGCTTC ACCGCCGCCG GCCTGGTCTT CGGCCACGGC
AGCGAGAACG CCTACGACGA AGCCGCCTAC CTGATCCTGC ACACGCTGCA CCTGCCGCTC
GACACGCTGG AGCCGTTCCT CGACGCGCGC CTGCTGCCCG AGGAGGTGGC CGCCGTGCTG
CAGGTGATCG AGCGCCGCAC CGTCGACCGC GTGCCCGCCG CCTACCTCAC GCACGAAGCC
TACATGCACG GCATGCGCTT CTACGTGGAC GAACGCGTGA TCGTGCCGCG CAGCTTCATC
GGCGAGCTGC TGGAAGAGGG ACTGGCCCCG TGGCTGCCGC ACGAGGACGG CCCGACCGAT
GTGCTGGAGC TGTGCACCGG CTCCGGCTGC CTGGCGATCC TGGCCGCGCT GCAATGGCCG
AACGCGACGC TCGATGCCGT GGACCTGTCG CCGGACGCGC TGGTGGTGGC GCAGCGCAAC
GTGGACGACT ACGGCCTGAA CGGCTGCATC CGCCTGCACG AAGGCGACCT GTATGCGCCG
CTGCCGCCGG GTGTGCACTA CGATGTGATC CTCACCAACC CGCCGTACGT GAACGAGACC
TCGATGCAGG CGCTGCCGCC CGAATACCGC GCCGAGCCCC GCATGGCGCT GGCCGGCGGC
ACCGACGGCA TGGACATCGT GCGCCGCATC CTGGCCGACG CGCCGCGCCA CCTCAAGCCG
CACGGCGTGC TGGTGGTCGA GATCGGCAAC GAGCGCGAGA ACGTGGAAGC CGCCTTCCCC
GACCTGGACC TGGTCTGGCT GCCCACCAGC GCCGGCGACG ATCAAGTGTT CCTGGTCACC
CGCGAGGCGC TCTGA
 
Protein sequence
MNPNMTVPAL PASHPFTTMR DLLRYAVSRF TAAGLVFGHG SENAYDEAAY LILHTLHLPL 
DTLEPFLDAR LLPEEVAAVL QVIERRTVDR VPAAYLTHEA YMHGMRFYVD ERVIVPRSFI
GELLEEGLAP WLPHEDGPTD VLELCTGSGC LAILAALQWP NATLDAVDLS PDALVVAQRN
VDDYGLNGCI RLHEGDLYAP LPPGVHYDVI LTNPPYVNET SMQALPPEYR AEPRMALAGG
TDGMDIVRRI LADAPRHLKP HGVLVVEIGN ERENVEAAFP DLDLVWLPTS AGDDQVFLVT
REAL