| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1381 |
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| Symbol | |
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| ID | 1220205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1473119 |
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| End bp | 1474042 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237759 |
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| Product | transmembrane ABC transporter protein |
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| Protein accession | NP_519502 |
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| Protein GI | 17546100 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.796345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAATT ACTTCCTCAA ACGTGTGCTG GGCGTGATCC CGACGCTGCT GATCGTGGCG
GTGCTGGTGT TCCTGTTCGT GCACCTGCTG CCGGGCGATC CGGCGCGCCT GGCCGCCGGT
ACCGACGCCG ACGAAGCGAC CGTCGAACTG GTGCGTAAGG ACCTGGGCCT GGACAAGCCG
ATGCACGAGC AGTTCGTGCA CTTCTTCGCC AATGCCGTGC GCGGCGAGTT CGGTGCGTCG
CTACGGACCA AGCGCCCGGT GAGCGAGGAG ATCGGCGACC GCTTCATGCC CACGCTCAAT
CTGACGATTG CCAGCATGGT GTGGGCCGTG ATCTTCGGCA TGGCCATCGG CATCGTCTCC
GCCGTCTGGC GCAACAAGTG GCCGGACCGC CTGGGCATGA CGCTGGCGGT CTCGGGTATT
TCGTTTCCCG CCTTCGCGCT GGGCATGCTG CTGATGGAGG TGTTCTCCGT GCAGCTCGGC
TGGCTGCCCT CGATCGGGGC CGACAGCTGG AAGCACTACA TCCTGCCGTC GCTGACGCTG
GGCGCCGCCG TGGCCGCGGT GATGGCGCGC TTCACGCGGG CATCGTTCGT CGAGGTGCTG
CAGGAAGACT TCGTGCGCAC CGCCCGCGCC AAGGGCGTGC GCGAGACCGT GGTGGTCGCC
AAGCATTGCC TGCGCAACGC GATGATCCCG GTGGTGACCA TGATGGGCCT GCAGTTCGGC
TTTCTGCTGG GCGGCTCGAT CGTGGTGGAG AAGGTGTTCA ACTGGCCGGG CCTGGGGCGC
CTGCTGGTGG ACGCGGTGGA GATGCGCGAC TACCCCGTCA TCCAGGCCGA GGTGCTGCTG
TTCTCGCTGG AGTTCATCTT GATCAACCTG GTGGTGGACA TTCTGTACAC CGTGATCAAC
CCGACCATCC GCTACGCGAA ATAA
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| Protein sequence | MLNYFLKRVL GVIPTLLIVA VLVFLFVHLL PGDPARLAAG TDADEATVEL VRKDLGLDKP
MHEQFVHFFA NAVRGEFGAS LRTKRPVSEE IGDRFMPTLN LTIASMVWAV IFGMAIGIVS
AVWRNKWPDR LGMTLAVSGI SFPAFALGML LMEVFSVQLG WLPSIGADSW KHYILPSLTL
GAAVAAVMAR FTRASFVEVL QEDFVRTARA KGVRETVVVA KHCLRNAMIP VVTMMGLQFG
FLLGGSIVVE KVFNWPGLGR LLVDAVEMRD YPVIQAEVLL FSLEFILINL VVDILYTVIN
PTIRYAK
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