| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1380 |
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| Symbol | |
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| ID | 1220204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1471501 |
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| End bp | 1473054 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637237758 |
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| Product | substate-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_519501 |
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| Protein GI | 17546099 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.630202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATC GATTCGCTTT GGGCCCGCGC GCGGCTATGC TCGCCGGCGG CCTTGCGCTG
GCGGCATTCA CCATGCCGGC CTTTGCCGCC AAGGATGCGG TGATGGCGGT CTACTCGACC
TTCACCACGA TGGACCCATA CGACGCCAAC GACACCCTGT CGTTCAGCGC CGCCAAGTCG
TTCTACCAGG GCCTGTTCGG CTTCGATAAG GACATGAAGC TGGTCAACGT GCTGTGCGAG
AGCTATGACG TGAGCAAGGA CGGCCTGGTC TACACGTTCA GGCTGCACAA GGGCGTGAAG
TTCCACGACG GCACCACGTT CGACGCCAAC GCCGTCAAGG CCAACCTGGA CCGCGTGACC
AATCCGGCCA ACAAGCTCAA GCGCTACACG CTGTTCAACC GCGTGGCCAA GACCGAGGTG
GTGGACCCAT ACACCGCGCG CGTGACGCTC AAGGAGCCGT TCTCGCCGTT CGTCAACGTG
CTGGCGCACC CGTCGGCGGC CATGATCTCG CCGGCCGCGC TGCAGAAGTA CGGCAAGGAC
ATCGCCTTCC ACCCGGTGGG CACCGGCCCG TTCGAATTCG TCGAATGGAA GCAGACCGAC
TACCTGAAGG GCAAGAAATT CGCCGGCTAC TGGAAGACCG GCCTGCCGAA GATCGACACC
ATCACGTGGA AGCCGGTGGT CGACAACAAC ACCCGCGCCA CCGTCATGCA GACGGGCGAG
GCCGATTTCG CCTTCAGCAT CCCGTTCGAG CAGGCTGCCG TGCTCAAGGG CAGCCCGAAG
GTCGACCTGA TCGCCGCGCC GTCGATCATC CAGCGCTACA TCACGTTCAA CACCCGCGTG
AAGCCGTTCG ACAACCCGAA GGTGCGCCAG GCGATCAACT ACGCCATCAA CAAGGATGCG
CTGACCAAGG TGGCCTTCTC GAGCTATGCC GTGCCGGCCG ACGGCGTGGT GCCGCAGGGC
GTGGACTACG CCGTCAAGCT GGGCCCGTGG CCGTACAACC CGGCCAAGGC GCGCGCGCTG
CTGAAGGAGG CGGGCTACCC CGACGGCTTC GAGACGCAGC TGTGGTCGGC CTATAACCAC
ACCACGGCAC AGAAGATCAT CCAGTTCGTG CAGCAGCAGC TGGCGCAGGT CGGCATCAAG
GCGCAGGTGC AGGCGCTGGA AGCCGGCCAG CGCGTCGAGC GTGTCGAGAG CGTGCAGAAG
CCCGAGGATG CCGGCGTGCG CATGTACTAC ATGGGCTGGT CGAGCTCGAC GGGTGAGTCC
GACTGGGCGA TTCGTCCGCT GCTGGCGTCC GAGGCCATGC CGCCCAAACA GCTGAACACC
GCGTACTACA AGAACGACCA GGTCGATGCC GACATCGCCG GTGCGCTGCG CACGACCGAT
CGCGCCGAGA AGACCAAGCT GTACACCGAC GCGCAGAAAC GCATCTGGGA AGACGCGCCG
TGGGCCTTCC TGGTGACGGA GAAGGTGGTC TACGCGCGCG CCAAGCGTCT GTCAGGTGCC
TATGTGGCGC CGGACGGCTC GTTCAGCTTC GACGACATCG ATATCAAGCA GTGA
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| Protein sequence | MFNRFALGPR AAMLAGGLAL AAFTMPAFAA KDAVMAVYST FTTMDPYDAN DTLSFSAAKS
FYQGLFGFDK DMKLVNVLCE SYDVSKDGLV YTFRLHKGVK FHDGTTFDAN AVKANLDRVT
NPANKLKRYT LFNRVAKTEV VDPYTARVTL KEPFSPFVNV LAHPSAAMIS PAALQKYGKD
IAFHPVGTGP FEFVEWKQTD YLKGKKFAGY WKTGLPKIDT ITWKPVVDNN TRATVMQTGE
ADFAFSIPFE QAAVLKGSPK VDLIAAPSII QRYITFNTRV KPFDNPKVRQ AINYAINKDA
LTKVAFSSYA VPADGVVPQG VDYAVKLGPW PYNPAKARAL LKEAGYPDGF ETQLWSAYNH
TTAQKIIQFV QQQLAQVGIK AQVQALEAGQ RVERVESVQK PEDAGVRMYY MGWSSSTGES
DWAIRPLLAS EAMPPKQLNT AYYKNDQVDA DIAGALRTTD RAEKTKLYTD AQKRIWEDAP
WAFLVTEKVV YARAKRLSGA YVAPDGSFSF DDIDIKQ
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