| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1379 |
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| Symbol | |
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| ID | 1220203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1469583 |
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| End bp | 1471466 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237757 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_519500 |
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| Protein GI | 17546098 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCAA CCCAGCAGAC CGAGACCGCC ATCGCGATGC CCGAGCAGCG CATCGTGCAG
GTGCAGGACC TGAGCGTGCG CTTCGCCACG TCCGAGCGCG TGGTCGATGC GGTGCGCAGC
CTGTCGTTCC ACGTCGATCG CGGCGAGACG CTGGCGGTGG TGGGCGAATC GGGCTCGGGC
AAGTCGGTGA CCTCGCTCGC GCTGATGCGG CTGGTGGAGC ACGGCGGCGG CCGGATCGTC
GGCGGCCACA TGCATCTGCG CCGGCGCGGC GGCGAGGTGC TCGACCTGGT GAACGCCAGC
CAGGCCGCCA TGCGGGGCGT GCGCGGCGCC GACATCGCCA TGATCTTCCA GGAGCCGATG
ACCTCGCTCA ACCCGGTCTT CCCGGTGGGC GAGCAGATCG CCGAGTCGAT CCGGCTGCAC
CAGGGCAAGT CGCGCGCCGA AGCCCGGGCC GAGGCGCTGC GCATGCTGGA GCAGGTGCGC
ATTCCCGAGG CGCGGCGGGT GCTGGCGCGC TATCCGCATC AGCTCTCGGG CGGCATGCGC
CAGCGCGTGA TGATCGCGAT GGCGCTGTCG TGCCGGCCGT CGCTGCTGAT CGCCGACGAG
CCGACCACGG CGCTGGACGT GACCATCCAG GCCGAGATCC TGCAGCTGAT CCGCGCGCTG
CAGCAGGAGA TGCGGATGGC GGTCGTCTTC ATCACGCACG ACATGGGCGT GGTGGCGGAG
GTGGCCGACC GCGTGCTCGT GATGTACAAG GGCGAGCGCG TGGAGGCGGG GCCGTCGGCC
GAGGTGTTCG CGCAGCCGGC GCATCCGTAC ACGCGCGCGC TGCTGTCGGC GGTGCCCCAA
CTGGGCGCGA TGGCGGGCAC CGACGGGCCG GCGCGTTTCC CGCTGGTGCG CGTGGACGGC
ACCGGCCTGC CGATCGACAC CACCCCGCAG CCGGCCGTGC CGCACGCCGG GCAGCCGATT
CTGCGCGTGC GTGACCTGGT GACGCGCTTC GACGTGCCGG CCGGGCTGTT CGGCCGGGTC
GCGCGGCGCG TGCACGCGGT GGAGCGCGTC AGCTTCGATC TGTATCCGGG CGAGACGCTG
GCGCTGGTGG GCGAATCGGG CTGCGGCAAG TCGACCACCG GACGGTCGCT GCTGCGGCTG
GTGGACAGCC AGAGCGGCAG CATCGAGTTT GCCGGCCAGA ACATCGGCGC GCTCAAGGGG
CATGCGCTGC AGACGCTGCG CCGGAATATC CAGTTCATCT TCCAGGACCC GTTCGCCTCG
CTGGACCCGC GCGTGCCGGT CGGCTATTCG ATCATGGAGC CGCTGCTGGT GCACAAGGTG
GCCTCCGGCC GGCAGGCGCA GGAGCGGGTG GAGTGGCTGC TCGACAAGGT CGGCCTGCAG
GCGGCGCACG CGGCGCGCTA TCCGCACGAA TTCTCGGGCG GCCAGCGCCA GCGCATCTGC
ATCGCGCGCG CGCTGGCGCT GAACCCGAAG GTGGTGATCG CCGACGAGTC GGTCTCGGCA
CTGGACGTGT CCATCCAGGC GCAGATCGTC AACCTGATGC TCGACCTGCA GAAGGAATTC
GGTATCGCCT TCCTGTTCAT CTCGCACGAC ATGGCGGTGG TGGAGCGCAT CAGCCACCGC
GTGGCGGTGA TGTACCTGGG CCAGATCGTC GAGATCGGCC CGCGCCGGGC GATCTTCGAG
AACCCGCAGC ATCCGTACAC GAAGAAGCTG ATGTCGGCGG TGCCGATCGC CGACCCGGCG
CGCCGCCACC TGAAGCGCGA GCTCTCCACG CACGAGATTC CCAGCCCGAT CCGCGCCATC
GGCGACATGC CGGTGGTGCG GCCGCTGGAG CAGGTGGCGC CAGACCACTT CGTCGCCCGC
CATGCGATCG GCGGCGCCTA TTGA
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| Protein sequence | MTATQQTETA IAMPEQRIVQ VQDLSVRFAT SERVVDAVRS LSFHVDRGET LAVVGESGSG
KSVTSLALMR LVEHGGGRIV GGHMHLRRRG GEVLDLVNAS QAAMRGVRGA DIAMIFQEPM
TSLNPVFPVG EQIAESIRLH QGKSRAEARA EALRMLEQVR IPEARRVLAR YPHQLSGGMR
QRVMIAMALS CRPSLLIADE PTTALDVTIQ AEILQLIRAL QQEMRMAVVF ITHDMGVVAE
VADRVLVMYK GERVEAGPSA EVFAQPAHPY TRALLSAVPQ LGAMAGTDGP ARFPLVRVDG
TGLPIDTTPQ PAVPHAGQPI LRVRDLVTRF DVPAGLFGRV ARRVHAVERV SFDLYPGETL
ALVGESGCGK STTGRSLLRL VDSQSGSIEF AGQNIGALKG HALQTLRRNI QFIFQDPFAS
LDPRVPVGYS IMEPLLVHKV ASGRQAQERV EWLLDKVGLQ AAHAARYPHE FSGGQRQRIC
IARALALNPK VVIADESVSA LDVSIQAQIV NLMLDLQKEF GIAFLFISHD MAVVERISHR
VAVMYLGQIV EIGPRRAIFE NPQHPYTKKL MSAVPIADPA RRHLKRELST HEIPSPIRAI
GDMPVVRPLE QVAPDHFVAR HAIGGAY
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