Gene RSc1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1378 
Symbol 
ID1220202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1468578 
End bp1469540 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content73% 
IMG OID637237756 
ProductL-asparaginase precursor protein 
Protein accessionNP_519499 
Protein GI17546097 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC CGATCCTCGC CATCCATGGC GGCGCCGGCA CCATTACCCG GGCGGCGATG 
GACGCCGACA AGGAAGCCGC CTACCGGCAG GCGCTCGACG GCATCCTGCT GGCCGGCCAG
CGCATTCTGG CCGGCGGCGG CAGCGCGCTC GACGCCGTGA CCGAAGCCGT GCGCCTGCTG
GAAGCGTGCC CGCTGTTCAA TGCCGGCAAG GGGTCCGTGC TCACGCGCGC GGGCACCTAC
GAGCTGGATG CCTCGATCAT GGACGGCACC ACGCTGGCCG CCGGCGCGGT GACCTGCGTC
AAGCGCCTGC GCCATCCCGT GCTGGCCGCG CGCGCCGTGA TGGAGCACAG CGAGCACGTG
CTGTTCACCT CCGAGGGCGC CGAGGCGTTC GCCGCGTCGC AGGGACTGGA GTTCGTCGAG
CCGGACTACT ACTACACCGA GGCGCGCTAC GCCCAGTGGC AGCGCGCCCG CCAGCACGCC
GGCATGGCGC TGCTCGACCA CGATGCGGCA TCCCTGCTGG CGCAGGCGCC CGAGCCGATC
GATCCCGACA GCAAGTTCGG CACCGTGGGC GCGGTCGCGT GCGATGCGCA GGGCCGGCTG
GCGGCGGCCA CGTCCACCGG CGGCGTCACC AACAAGCAGG TCGGCCGGGT GGGCGACACG
CCGCTGATCG GCGCCGGCTG CTACGCCAAC CGCGCCGCCG CCGTGTCGTG CACCGGCACC
GGGGAGATGT TCATCCGCGC CGTGGCCGCC TACGACGTGG CCGCGCAGAT GGAATACGCC
GGCAAGCCGC TGGCCGAGGC CTGCGACGAC GTGGTGATGC GCAAGCTGGT CGCCATCGGG
GGGCGCGGCG GGCTGATCGC GGTGGACGCG CACAGCAACG TGGCGCTGCC GTTCAACACC
GAGGGCATGT ACCGGGGCTT CGCGCGCGGG GATGCCGCGC CCGAGGTCTC GATTTACCGA
TAG
 
Protein sequence
MPTPILAIHG GAGTITRAAM DADKEAAYRQ ALDGILLAGQ RILAGGGSAL DAVTEAVRLL 
EACPLFNAGK GSVLTRAGTY ELDASIMDGT TLAAGAVTCV KRLRHPVLAA RAVMEHSEHV
LFTSEGAEAF AASQGLEFVE PDYYYTEARY AQWQRARQHA GMALLDHDAA SLLAQAPEPI
DPDSKFGTVG AVACDAQGRL AAATSTGGVT NKQVGRVGDT PLIGAGCYAN RAAAVSCTGT
GEMFIRAVAA YDVAAQMEYA GKPLAEACDD VVMRKLVAIG GRGGLIAVDA HSNVALPFNT
EGMYRGFARG DAAPEVSIYR