| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1374 |
|---|
| Symbol | |
|---|
| ID | 1220198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1463740 |
|---|
| End bp | 1464261 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637237752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519495 |
|---|
| Protein GI | 17546093 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1683] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0678885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTGC ATCGCGTCCT GGTCAGCGCC TGCCTGCTGG GGCAGCCGGT GCGCTACGAC
GGCGGTACGG TGATCGTCGA GGGGGGCATC CTGGCGCGCT GGCAGATGGA AGGGCGCATC
GTGCCGATGT GCCCGGAGAT GGCCGGCGGC CTGCCGGTGC CGCGCCTGCC GGCGGAAATC
CGCGGCGAGG GCGGCGGCGC GGCCGTGCTG CGCGGCACGG CCCGCGTGGT GGAGCACCAT
GGCCACGATG TGACCGACGC ATTCGTGCGG GGCGCGCAAC GCGCCCTGGC GGCGGCGCAG
GAGGCTGGCG TGCGGGTGGC CGTGCTGACC GAGCGCAGCC CGTCCTGCGG GTCCGCGTTT
CTCTATGACG GCTCGTTCTC CGAGCAGCTG CTGCACGGCG AGGGCGTGAC CGCGGCGGCG
CTGCGCCAGC ATGGCATCCG TGTGTTCAGC CAGCACCAGC TCGATGAGGC CGCGCGCCTG
CTCGACGCGC TGGACCACGG CGAGTCAATC CCGGAAGCGT AG
|
|---|
| Protein sequence | MPVHRVLVSA CLLGQPVRYD GGTVIVEGGI LARWQMEGRI VPMCPEMAGG LPVPRLPAEI
RGEGGGAAVL RGTARVVEHH GHDVTDAFVR GAQRALAAAQ EAGVRVAVLT ERSPSCGSAF
LYDGSFSEQL LHGEGVTAAA LRQHGIRVFS QHQLDEAARL LDALDHGESI PEA
|
|---|
| |