Gene RSc1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1326 
Symbol 
ID1220150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1411206 
End bp1412447 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content64% 
IMG OID637237704 
Productaminotransferase AlaT 
Protein accessionNP_519447 
Protein GI17546045 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0763036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACGA TCCAGAAATC CGCCAAGCTC AACAACGTCT GCTATGACAT CCGCGGCCCC 
GTGCTGGAGA AGGCCAAGCA GATGGAGGAA GAGGGCCACC AGATCATCAA GCTGAACATC
GGCAACCTGG CCCCGTTCGG CTTCGATGCC CCGGAAGAGA TCCAGCAGGA CATGATCCGC
AACCTGCCCA ACTCGGCCGG CTACTCGGAT TCCAAGGGCA TCTTCGCGGC GCGCAAGGCG
GTGATGCACT ATACGCAGCA GCAGGGCATC AAGAACGTCA CGCTGGACGA CATCTACCTG
GGCAACGGCG CCTCCGAGCT GATCGCGCTG GCCACCAACG CGCTGCTCGA CGCCGGCGAC
GAACTGCTGC TGCCCGCACC CGATTACCCG CTGTGGACCG CCATGACCAG CCTGTCGGGC
GGCACGCCGG TGCATTACCT GTGCGACGAG TCCAACGGCT GGATGCCCGA CCTGGACGAC
ATCCGCGCCA AGATCACGCC CAACACCAAG GGCATCGTCG TCATCAACCC GAACAATCCG
ACCGGTGCGC TGTATTCGGA CGCGCTGCTG CACGACATCA TCGCCATCGC ACGCGAGCAC
GGGCTGGTGA TCTTTGCCGA CGAGGTGTAC GACAAGGTGC TGTTCGACGA CAATCGGCAC
ACCGCGATGG CCTCGCTGTC GGAGGATGTG CTGACCGTCA CGTTCAACAG CCTGTCCAAG
AGCTACCGCT CGTGCGGCTA CCGCGCGGGC TGGATGGTGG TGTCGGGCGA CAAGCGTCCG
GCCAAGGACT ACATCGAAGG CCTGAACATG CTGTCGTCGA TGCGCCTGTG CGCCAATGTG
CCGGGGCAGT GGGCGATCCA GACGGCGCTG GGCGGCTATC AGAGCATCAA CGACCTGGTG
GCGCCGGGCG GCCGCATGCG CCGCCAGCGC GACCTGGCCT ACGAACTGAT CACCGCCATT
CCCGGCGTGA GCTGCGTCAA GCCGAAGGCG GCGCTGTACA TGTTCCCGCG CCTGGATCCG
TCGGTGTACC CGATCGACGA CGATCAGACC TTCATTCGCC AACTGCTGGA GGAAGAGCGC
GTGCTGCTGG TGCAGGGCAC GGGCTTCAAC TGGCATTCGC CGGACCACTT CCGCATCGTC
TTCCTGCCGC ACGAGGACGA CCTGCGCGAG GCCATCGGCC GAATTGCGCG CTTCCTGGAG
CGGTACCGTC AGCGTCACGG TACTGGCATC CGGGCCGCCT GA
 
Protein sequence
MKTIQKSAKL NNVCYDIRGP VLEKAKQMEE EGHQIIKLNI GNLAPFGFDA PEEIQQDMIR 
NLPNSAGYSD SKGIFAARKA VMHYTQQQGI KNVTLDDIYL GNGASELIAL ATNALLDAGD
ELLLPAPDYP LWTAMTSLSG GTPVHYLCDE SNGWMPDLDD IRAKITPNTK GIVVINPNNP
TGALYSDALL HDIIAIAREH GLVIFADEVY DKVLFDDNRH TAMASLSEDV LTVTFNSLSK
SYRSCGYRAG WMVVSGDKRP AKDYIEGLNM LSSMRLCANV PGQWAIQTAL GGYQSINDLV
APGGRMRRQR DLAYELITAI PGVSCVKPKA ALYMFPRLDP SVYPIDDDQT FIRQLLEEER
VLLVQGTGFN WHSPDHFRIV FLPHEDDLRE AIGRIARFLE RYRQRHGTGI RAA