| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1322 |
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| Symbol | |
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| ID | 1220146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1407143 |
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| End bp | 1408303 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237700 |
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| Product | putative aminotransferase protein |
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| Protein accession | NP_519443 |
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| Protein GI | 17546041 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.359919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA CCAACGCCGT CGCCGAACAA CCGTTCCTGC CCTTCGTGCG CCCCACCATC
GACGAGGCGA CCATCGCCGC CGTGGCCGAT GTGCTGCGCT CGGGCTGGAT CACCTCGGGC
CCCAAGGTCG CCGCGTTCGA AGCCGCGCTG TCGGAATACT TCGGCGGCCG CCCGGTGCGC
ACCTTCGCCA ACGGCACCGC CACGATGGAA GTGGCGCTGC GCGTCGCGGG CATCGGCCCC
GGCGACGAGG TCATCACCAC GCCCATCTCG TGGGTGGCCA CCTCCAACGT GGTGCTGACG
GTCGGCGCCA GGCCCGTCTT CGTCGACATC GACCCAGTCA CCCGCAACAT CGACCTGGAC
AAGATCGAGG CCGCCATCAC GCCGCGCACG CGCGCGATCA TCCCGGTCTA CCTGTCGGGC
CTGCCGGTGG ACATGGACCG CCTGTACGAC ATCGCCCGCC GCCACAAGCT GCGCGTGGTG
GAAGACGCCG CGCAGGCCAT CGGCTCGCGC TGGGGCGACC AGCGCATCGG CCAGCTCGGC
GACCTGGTCA GCTTCAGCTT CCAGGCCAAC AAGAACATCA CCACCATCGA GGGCGGCGCG
CTCGTGCTGA ACACGCCCGA AGAAGCCGTG CTGGCCGAGA AATACCGCCT GCAGGGCGTG
GTCCGCACCG GCTTCGACGG CATGGAAGTC GACGTGGTGG GCGGCAAGTT CAACCTGACC
GACGTCAACG CCGCCATCGG CCTCGGCCAG TTCGCCCAGC TGGAGGCCAT CACCGCGCGC
CGCGCCGCGC TGGCCCGCCG CTACTTCGCC GCCATGCGCG CGGCCAACAT CGAATCGTTC
GGCATCGAGC TGCCGGTCGA AGATTTCGCG CACACCAACT GGCACATGTT CCAGATCGTG
CTGCCGCTCG ATCGCCTCAA GGTCGATCGC GCCGGCTTCA TGGCCGGGCT GAAGGCCATG
GGCATCGGCA CCGGCGTGCA CTATCCGCCC ATCCACCTGT TCAAGCTGTA CCGCGAGCTC
GGCTGGGGCC CGGGCATGTT CCCGGTGGCC GAGCGCATCG GGCGCGCCAT CGTGACGCTG
CCGATGTTCG CCGCCATGGA AGATTCCGAC GTGGACCGCG TAGTCAATGC GGTCCGCCAA
CTCTGCATCC AACACCAATA A
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| Protein sequence | MTQTNAVAEQ PFLPFVRPTI DEATIAAVAD VLRSGWITSG PKVAAFEAAL SEYFGGRPVR
TFANGTATME VALRVAGIGP GDEVITTPIS WVATSNVVLT VGARPVFVDI DPVTRNIDLD
KIEAAITPRT RAIIPVYLSG LPVDMDRLYD IARRHKLRVV EDAAQAIGSR WGDQRIGQLG
DLVSFSFQAN KNITTIEGGA LVLNTPEEAV LAEKYRLQGV VRTGFDGMEV DVVGGKFNLT
DVNAAIGLGQ FAQLEAITAR RAALARRYFA AMRAANIESF GIELPVEDFA HTNWHMFQIV
LPLDRLKVDR AGFMAGLKAM GIGTGVHYPP IHLFKLYREL GWGPGMFPVA ERIGRAIVTL
PMFAAMEDSD VDRVVNAVRQ LCIQHQ
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