Gene RSc1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1315 
Symbol 
ID1220139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1399966 
End bp1400391 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID637237693 
Productputative signal peptide protein 
Protein accessionNP_519436 
Protein GI17546034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTGC AGCGAAATCC GCAGTTCCGT ACGCGCTCGG CACTGCCGTC GGTCGCACTG 
GCGATGTTGT TGTCCGCCGG CGCGTCCGTT GCGCTTGCCG ACAACCTCGT ACCAAAGACC
GCCGGCCAGA TCAGCTACGT CTGCGGCGGT GTCGCGCAAG ATGAACAGGA GGCCCTGAAC
GCCGAGGCGC GCAACTACAA CCTGTCCCTG CTCTTCACGC AAGGGCCGCG CGGTGAATAC
CTCGCCGATG TCGACGTCCA GCTCACGCGG CACGGCAAGG AAGTCGCCAG CTTCCGCGCT
GACGGACCGC GCTGCCTGAT CAAGGCACCG CCGGCCAGCT ACAACATCAT CGCCACCTAC
GAGGGCGCGA CCAAGCGCGC CACGGTGCAG ACCGGCAGCA CGCGCAACGT CCAGTTGCGC
TGGTAA
 
Protein sequence
MHVQRNPQFR TRSALPSVAL AMLLSAGASV ALADNLVPKT AGQISYVCGG VAQDEQEALN 
AEARNYNLSL LFTQGPRGEY LADVDVQLTR HGKEVASFRA DGPRCLIKAP PASYNIIATY
EGATKRATVQ TGSTRNVQLR W