Gene RSc1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1306 
SymbolansB 
ID1220130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1392915 
End bp1394018 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID637237684 
ProductL-asparaginase II precursor signal peptide protein 
Protein accessionNP_519427 
Protein GI17546025 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00520] L-asparaginases, type II 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGCCA ACAGGACGCC GGCCCTTGCG CCGGCGTTTT TCATTTGGCG CGAAAGCGCG 
GCGGGCGGAT ACAATGCGCC GCGTCACAAT TTCCTGCTTG TCGCGCCGAT GTCCTCGTTG
CCCACTATCG CCATTCTCGC CACCGGCGGC ACCATTGCCG GCTCGGCGGA CGATTCCGCT
TCCGCGGCCC GCTATCGTGC CGGTGCCGTG CCCATCGACC AGTTGCTGGC AGCCAGCAAG
CTGGGCCTGG AACGCATCGC CAACGTGCGC GCCGAGCAGG TCGCGCAGAT CGACAGCAAG
GACCTGACCT TCGACGTGTG GGAGCGTCTG GTGGCGCGGA TCCGTCACTG GATCGATGTG
GAGCGTGTGG ACGGCGTGGT CATCACGCAC GGCACCGACA CGCTCGAGGA AACCGCGATG
CTGCTGCACC TGGTGTTGCA GACTGACATG CCCATCGTCA TGACCGCGGC GATGCGGCCG
TCGACGTCGT TGTCGGCGGA TGGTCCGCTG AACCTGCTCA ATGCCGTGCG CGCAGCCGCC
AGCCCTGCCT CGCGCGGGCG TGGCGTGCTG GTGGCCCTGA ATCAGCGCGT CCATGCGGCG
CGCGACGTGC AGAAGGGGCA CACCTACGCT GTCGAGGCGT TTGTGTCGCC GGACGTCGGT
CCGCTTGGCT TCGTGCTGGA CGCCGCAGTG CAATACCAGC GCGCCGCCCA GCTGCCGGCC
GCGGCTGACG GGCTGCCGAT GCCGGCTGTC GGGCAATGGC CGTGGGTCGA GGTGCTGTCG
AGCTACGCTC AGCCCGATGC GCGCCTGGTC GACGCTCTGG TGGAGGCCGG TGTGCGCGGG
CTGGTCATTG CCGCGACGGG GGCGGGGTCC ATCCACGTCA ATCTGGAAGC TGCGCTGCAG
CAGGCGGTCA AGCAGGGCGT GATTGTGCTG CGTTCGACCC GGACTGGGGC CGGCGTGGTG
CCGGCGCATC CCGACGGGCA GGGCTGGGCA TCGTCCGGGA CGCTCAACCC GTACAAGGCG
CGCGTGCTTC TGATGCTGCT GATTGCCGCC GGCCATGCCC AGGCAGAAAC GGCCTCCCTG
CAGCAAGTCA TTGATCGATA TTGA
 
Protein sequence
MLANRTPALA PAFFIWRESA AGGYNAPRHN FLLVAPMSSL PTIAILATGG TIAGSADDSA 
SAARYRAGAV PIDQLLAASK LGLERIANVR AEQVAQIDSK DLTFDVWERL VARIRHWIDV
ERVDGVVITH GTDTLEETAM LLHLVLQTDM PIVMTAAMRP STSLSADGPL NLLNAVRAAA
SPASRGRGVL VALNQRVHAA RDVQKGHTYA VEAFVSPDVG PLGFVLDAAV QYQRAAQLPA
AADGLPMPAV GQWPWVEVLS SYAQPDARLV DALVEAGVRG LVIAATGAGS IHVNLEAALQ
QAVKQGVIVL RSTRTGAGVV PAHPDGQGWA SSGTLNPYKA RVLLMLLIAA GHAQAETASL
QQVIDRY