Gene RSc1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1305 
Symbolfpr 
ID1220129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1392131 
End bp1392907 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content62% 
IMG OID637237683 
Productferredoxin--NADP reductase 
Protein accessionNP_519426 
Protein GI17546024 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTT TCAATCAAGA GACCGTTCTG AGCGTCCATC ACTGGAACGA ATCGCTGTTC 
AGCTTCCGTA CCACGCGCGA CAAAGCCTTG CGCTTCCATA ACGGCCACTT TGTCATGCTG
GGCCTGGAAG TCGAGGGCAA GCCGCTGATG CGTGCCTACA GTATCGCCAG CCCCAACTAC
GAAGAACACC TGGAGTTCTT CAGCATCAAG GTGCAGAACG GCCCGCTGAC GTCGCGCCTG
CAGCACCTGA AGGTCGGTGA CACCGTGCTG GTCAGCCGCA AGCCGGTCGG CACGCTGGTG
CTGGACGACC TGCTGCCCGG CAAGAACCTC TACCTGTTCG GCACCGGCAC CGGCCTGGCG
CCGTTCATGA GCATCATCCA GGATCCCGAA ACCTACGAGC GCTTCGAGAA GGTCGTGCTG
CTGCACGGCG TGCGCCAGGT CAGCGAACTG GCCTATGCCG ATTTCATCAC CAGCGAGCTG
CCGAACAACG AATTCTTCGG CGACCAGGTT CGCGAGAAGC TGATCTACTA CCCGACCGTC
ACTCGCGAGC CCTTCCGCAA CATGGGCCGC CTGACGGATC TGGCCGATAG CGGCAAGCTG
TTCGACGACA TTGGCCTTGC GCCGCTGGAC CCGGCGGTGG ATCGCGCCAT GATCTGCGGC
AGCCCCGCCA TGCTGGAAGA CACCTGCAAG CTGCTGGATG CGCGCGGCTT CAAGATTTCG
TCGCGCATGG GCGAGGCAGG CGACTATGTG ATCGAGCGCG CCTTCGTCGA GAAGTAA
 
Protein sequence
MSAFNQETVL SVHHWNESLF SFRTTRDKAL RFHNGHFVML GLEVEGKPLM RAYSIASPNY 
EEHLEFFSIK VQNGPLTSRL QHLKVGDTVL VSRKPVGTLV LDDLLPGKNL YLFGTGTGLA
PFMSIIQDPE TYERFEKVVL LHGVRQVSEL AYADFITSEL PNNEFFGDQV REKLIYYPTV
TREPFRNMGR LTDLADSGKL FDDIGLAPLD PAVDRAMICG SPAMLEDTCK LLDARGFKIS
SRMGEAGDYV IERAFVEK