Gene RSc1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1280 
Symbol 
ID1220103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1362765 
End bp1364198 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content66% 
IMG OID637237657 
Productiron-sulfur 4Fe-4S ferredoxin transmembrane protein 
Protein accessionNP_519401 
Protein GI17545999 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.235567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.382764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCG CCACCGCAGC GGCGGACGGC CAGGATGCGC CCACCGAACA AATGCTGTAC 
GAGGTGCGGC GCAAGATTTA TCCGCGTGCC GTCACGGGGG CATTCGCGCG TTGGCGCGTC
TGGCTGGTGC TGGCCACGCA GGCCGTGTTC TATGGGCTGC CGTGGTTGCA GTGGCATGGC
CGGCAGGCTG TCCTGTTCGA TCTCGGTGCG CGCAAGTTCT ACCTGTTCGG CCTGGTGCTC
TGGCCGCAGG ACGTGATCTA CCTGACGGTG CTGCTGGTGC TGTCGGCGTT GTCGCTGTTC
CTGTTCACGG CGGTGGCGGG GCGCTTGTTC TGTGGCTACG CCTGTCCGCA AACGGTCTAC
ACCGAAATCT TCATGTGGAT CGAGCGGCAT ATCGAAGGCG ACCGCTTCGC CCGCATCCGC
CTCGATGGCG AGCGCTGGAG CGTGCGCAAG CTGCGCCTGA AGACGGCCAA GCACAGCGCC
TGGATCCTGA TCGCGCTGTG GACCGGCTTC ACCTTCGTCG GCTTCTTCAC GCCGATCCGC
GAGCTGGGCA TGGAGGTCTG GACGTTGTCG CTCGGGCCGT GGCAGACCTT CTGGATGCTG
TTCTATGCCT TTGCGACCTG GGGCAATGCG GGCTTCATGC GCGAGCAGGT CTGCCGCTAC
ATGTGCCCGT ATGCGCGTTT CCAGAGCGTG ATGGTCGACC GCGATACTTA TGTGGTCACC
TACGATACGC AGCGCGGTGA GCCGCGCGGC AGCCGCTCGC GCAACGAGGA TTTCGCGGCC
AGGGGACTCG GGGCCTGCGT CGATTGCAGC ATCTGCGTGC AGGTGTGCCC GACCGGCATC
GATATCCGCC AGGGCCTGCA ATACGAGTGC ATTGGCTGCG GCGCCTGCAT CGATGCCTGC
GATCAGGTGA TGGACAAGAT GCGCTACCCG CGCGGCTTGA TCCGCTACAC CTCGGAGCGC
GCCATGCGCG ACCGGCTGCC CCCGGGCGAG GCGCGCCGGC ATCTGCTGCG CCCGCGCGTG
CTGATCTACA GTGGGGTCCT GCTGACCCTG GCGGCGGGCC TGATCGTGGC GCTGGCCTTG
CGTGCACCGC TGAAGGTCGA CGTGATCCGC GACCGCGGCG CGCTGGCGCG CGAAGTGGAC
GGCGACAAGA TCGAGAACGT CTATCGGCTG CAACTGATGA ATGCATCCGA GCAGCCCATG
CGCGTGACCA TCACTGCCGA AGGCCTGCCG CAGCTTGAAG TGCAGGGCGG ACGAGGCGAG
TCGACCACGC TCGAGCTGGC TCCGGCGGCC AACCGTCTCG TGCCGATCCG CGTACGCCGT
CCCGCAGACG ACGTGCAGCC CGGCTCGCAC AAGATCCGCT TCGTGATCCA GGCAGACAAG
GACGGCGGCA GTCTCGTGCT GCGCGAGCCG TCCAGCTTTA TCGTGCCGCG CTAG
 
Protein sequence
MSPATAAADG QDAPTEQMLY EVRRKIYPRA VTGAFARWRV WLVLATQAVF YGLPWLQWHG 
RQAVLFDLGA RKFYLFGLVL WPQDVIYLTV LLVLSALSLF LFTAVAGRLF CGYACPQTVY
TEIFMWIERH IEGDRFARIR LDGERWSVRK LRLKTAKHSA WILIALWTGF TFVGFFTPIR
ELGMEVWTLS LGPWQTFWML FYAFATWGNA GFMREQVCRY MCPYARFQSV MVDRDTYVVT
YDTQRGEPRG SRSRNEDFAA RGLGACVDCS ICVQVCPTGI DIRQGLQYEC IGCGACIDAC
DQVMDKMRYP RGLIRYTSER AMRDRLPPGE ARRHLLRPRV LIYSGVLLTL AAGLIVALAL
RAPLKVDVIR DRGALAREVD GDKIENVYRL QLMNASEQPM RVTITAEGLP QLEVQGGRGE
STTLELAPAA NRLVPIRVRR PADDVQPGSH KIRFVIQADK DGGSLVLREP SSFIVPR