| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1277 |
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| Symbol | |
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| ID | 1220100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1360923 |
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| End bp | 1361594 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237654 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | NP_519398 |
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| Protein GI | 17545996 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.782574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACC AACCTTCCCG CTTCTTCTCG CACGAGACGC TGGAAAAGAA CATCGGCCTG
CTGATCATCA TGACGTTGGT CGTGGTCAGC ATCGCCGGGC TGGTGCAGAT CGTGCCGCTG
TTCTTCCAGC ACTCCACCAC CGAGCCGGTC AAGGGCATCG CGCCGTATTC GCCGCTGCGG
CTGGCCGGGC GCGATATCTA CATCCGCGAA GGCTGCGTCG GCTGCCACTC GCAGCAGGTG
CGCACGCTGC GCGCCGAAAC CGAGCGCTAC GGCCATTACT CGATGGCGGG CGAGTCGGTG
TTCGACCACC CGTTCCTGTG GGGCTCGAAG CGGACCGGCC CGGACCTGGC GCGCGTCGGC
CAGCGCTACT CGGACGACTG GCATCGTATC CATCTGCGCG ACCCGCGCAT GGTGGTGCCC
GAGTCCAACA TGCCGTCCTA TGCATGGCTG TCCAAGACGC CGCTCGATAA CCATGACATC
GAAGCGAAGA TGCGTGTGCT GCGCAAGCTG GGTGTGCCAT ACACCGACGC GCAGATCGCA
GGCGCCCGCG AGCAGTTGGC CGGCAAGACC GAGGAGGACG CCGTAGTGGC CTATCTGCAG
GGCCTGGGCG TGGAACTGCG CAACGTGCGC GATGTGGCCG GGGTTCCGGT TGCCGCTGCC
GCCAAGGAGT AA
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| Protein sequence | MSNQPSRFFS HETLEKNIGL LIIMTLVVVS IAGLVQIVPL FFQHSTTEPV KGIAPYSPLR
LAGRDIYIRE GCVGCHSQQV RTLRAETERY GHYSMAGESV FDHPFLWGSK RTGPDLARVG
QRYSDDWHRI HLRDPRMVVP ESNMPSYAWL SKTPLDNHDI EAKMRVLRKL GVPYTDAQIA
GAREQLAGKT EEDAVVAYLQ GLGVELRNVR DVAGVPVAAA AKE
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