| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1274 |
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| Symbol | |
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| ID | 1220097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1356598 |
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| End bp | 1359153 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237651 |
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| Product | cation-transporting ATPase lipoprotein transmembrane |
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| Protein accession | NP_519395 |
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| Protein GI | 17545993 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCA TAATGACAAC GACGCTCGCC CCCATCCTTG CCGCCGCGCC CGGTGTCGGT
TCGGTCTCAT CCGGCCGGCC GGATGATGCG CAGGCGTCAC ACGTCACGTG CTATCACTGC
GGCGCATCAT TGGATGGCGA TGCCGCGTTG CATGCCGAGA TGGCCGGCCA GTCCCGCGAC
TTCTGCTGTG CCGGCTGCCA GACCATCGCC ATGACGCTGC ACGCGTCGGG CATGGGCCAC
GTCTACGACG GGCCGATCGC CTTCGCACGG CCCATCGACG GCGAGGTACG CACCGAGGCC
GAAGCCGCGT GGGCGACCTA CGACTTGCCG GTCATGCGCG AGCGCTTCGT CCGCACGCGC
AAGGATGGCG CCGAAGAGGT GTCGTTGACC CTGGCCGGCA TGCGCTGCGC CGCCTGCGTG
TGGCTCATCG AACGCGCGCT GGCGCGCGTG CCCGGTGTGC GCGAGGCCAT CGTCAACTAC
GCGACGGAGC GCGTGCGCAT CGTGTCCGAT GCCGGTGCGG TCCGGCTCGC CGACCTGTTC
GCCGCCATCG CCGACGTCGG CTACGAGGCG TGGCCGGACC AGCCTTCCAC GCGCCGCGCG
GCCGAGGCGC GCGAGCGGCG CCAGTTGCTG ATCCGTCTGG GCATCGCCAT GCTGGGCATG
ATGCAGGTGA TGATGTATGC GTGGCCGGTC TACCTGCATG GCGGCAGCAT CCCTGCGGAC
CAGGTCATGC TGATGCAGTG GGCCAGTCTC GCGCTGACCA CACCGGTCGT CCTGTTCTCC
GCCGGGCCTA TCTTCCGCAA TGCGTGGCGC CAGGTGCGGC ACGCGCATGT CGGCATGGAC
GTGCCGGTGG CGCTCGGCGT CGGCGCGGCC TTTGCCGCGA GCGTGGCCGC CATGGTGCGC
GGCCACGGCG AAACCTACTT CGATTCGGTG ACGATGTTCG TCGCTTTCCT GCTGGCGGCG
CGCTATCTGG AACTGCGCGC GCGGCAGAGC GCAACGTCCG GCACCGAGGC GCTGGTGCGG
CAACTGCCGG CCACCTGCCG GCGCATCGCC GATGGCGCCG AGGCGATGCA GACCGTTCCG
GTCGCCGCGC TGCAGGTCGG CGATTGCGTG GAGGTCCGCG CCGGCGAGAT CCTGCCGGCG
GATGGCGTGA TCGAACGCGG CACGACCGAG ATCGACGAAT CCCTGCTGTC CGGCGAGAGC
GTGCCGCAGC CGCGCGGCAT CGGCGCGATG GTGCTGGCAG GCAGCTACAA CGCGGCCAGC
GCGATTTGGC TGCGCGTGCA TCGCGTGGGG GCGCAGACGC GGCTGGCGGC GATCGTCGAA
CTGCTCGAGC GCGCGCTGAC CGACAAGCCG CGCATGGCCG AGCTCGCCGA TCGCGTGGCG
GGGCGTTTCG TGATGGTGTT GCTCGGCTGG GCCGTGCTGA CGGCGCTTGC GTGGTGGTGG
ATCGATCCGG ACCGCATGTT CGCCGTGACG GTGGCCGTGC TGGTGGTCAG CTGCCCGTGC
GCGCTGTCGC TGGCGACACC GTCCGCGCTG GCGGCGGCAA GCGGCGCGCT GGCCAGGCGC
GGCGTACTGA TCACGCGCGG GCACGCCATT GAAAGCCTGG CCGCCGTGAC CGACGTGCTG
CTCGACAAGA CCGGCACGCT GACGCAGGGC CACCTGCGCC TGCTCAGCAT CGAAACCTTC
GACGATCCCG ACGCGCAGCA GTGTCTTGCG CTGGCCTGTG CGCTCGAGCA GGCAGAGAAC
CATCCGATCG CGCAATCGCT GCGTGCCGCC GCCGCGCAGG GGCGGGTGCC GGCGGTGGCG
GTGAGCGACG TGCTCAACGT GCCGGGGCAG GGCGTGCGTG CCCGGCTGCA GATGCAGGAC
ATCCGCCTGG GCACCCAGGC GTTCGCGGCC CAGGCGTTCG ATGGGCAGCC GCCGCATGCC
ACCGCGCACG TCAGCGGCGA GCCGGCGGAG GACGTGCCGT CCGCCGCCTG CACGGCAATC
TGGCTCGGCT GCGACGGCCA CCCGCTGGCC CGCTTCGTTC TTGCCGATAC GCCGCGTGCC
GATGCGGCGG CTTGCCTGGA TGCGCTGCGT GCGCAGGACC TGCGGCTGCA TCTCGTTTCC
GGCGATGCGC CGCAGACCGT GCGCTGGTGG GCCGCGCGCC TGGGCATCGC GCATGCCGTG
GGCGGCGCCA GTCCCGAAGA TAAGCGTGCC TATGTGCGCG CGTTGCAGGC CGGCGGCGCT
CGCGTGCTGG CGGTGGGCGA CGGCATCAAC GATGCACCGC TGCTGGCGCA GGCGCAGGTC
TCGATCGCCA TCGGCACGGG CGCGCCGCTG GCGCAGGCCG GTGCCGACGC CATCCTCACG
GAGCCGCGCC TGCCCGCCAT CGGCGAGGCC GTCTCGATCG GCCGCCGCAC GCTGCGTGTG
GTGCGCCAGA ACCTGGGCTG GGCCTTCGCC TACAACGCCG TCAGCATCCC GCTGGCGACG
CTGGGCTGGC TGTCGCCGCT GGAGGCCGGG ATCGGCATGT CGGTGTCTTC GCTGCTGGTG
GCGCTCAACG CGTGGCGGCT GTCGCGCGTC GCATAG
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| Protein sequence | MFTIMTTTLA PILAAAPGVG SVSSGRPDDA QASHVTCYHC GASLDGDAAL HAEMAGQSRD
FCCAGCQTIA MTLHASGMGH VYDGPIAFAR PIDGEVRTEA EAAWATYDLP VMRERFVRTR
KDGAEEVSLT LAGMRCAACV WLIERALARV PGVREAIVNY ATERVRIVSD AGAVRLADLF
AAIADVGYEA WPDQPSTRRA AEARERRQLL IRLGIAMLGM MQVMMYAWPV YLHGGSIPAD
QVMLMQWASL ALTTPVVLFS AGPIFRNAWR QVRHAHVGMD VPVALGVGAA FAASVAAMVR
GHGETYFDSV TMFVAFLLAA RYLELRARQS ATSGTEALVR QLPATCRRIA DGAEAMQTVP
VAALQVGDCV EVRAGEILPA DGVIERGTTE IDESLLSGES VPQPRGIGAM VLAGSYNAAS
AIWLRVHRVG AQTRLAAIVE LLERALTDKP RMAELADRVA GRFVMVLLGW AVLTALAWWW
IDPDRMFAVT VAVLVVSCPC ALSLATPSAL AAASGALARR GVLITRGHAI ESLAAVTDVL
LDKTGTLTQG HLRLLSIETF DDPDAQQCLA LACALEQAEN HPIAQSLRAA AAQGRVPAVA
VSDVLNVPGQ GVRARLQMQD IRLGTQAFAA QAFDGQPPHA TAHVSGEPAE DVPSAACTAI
WLGCDGHPLA RFVLADTPRA DAAACLDALR AQDLRLHLVS GDAPQTVRWW AARLGIAHAV
GGASPEDKRA YVRALQAGGA RVLAVGDGIN DAPLLAQAQV SIAIGTGAPL AQAGADAILT
EPRLPAIGEA VSIGRRTLRV VRQNLGWAFA YNAVSIPLAT LGWLSPLEAG IGMSVSSLLV
ALNAWRLSRV A
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