| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1271 |
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| Symbol | |
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| ID | 1220094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1352948 |
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| End bp | 1354384 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237648 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | NP_519392 |
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| Protein GI | 17545990 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.547338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC AATTTGACGT GCTGGTGATC GGCGCCGGCC CCGGCGGCTA CATTGCCGCG
ATCCGCGCCG GCCAGCTGGG CCTGAACGTG GCCTGCTGCG AAGACAACGC CTACGACGAT
CCGAAGGGCG AGCCGCGCCT GGGCGGCACC TGCCTGAACG TCGGCTGCAT TCCGTCCAAG
GCGCTGCTGG CCTCGTCGGA AGAGTTCGAG AACGTGAACC ACCACCTGGC CGACCACGGC
ATCACGGTGG ACGGCGCCCG CGTCGATGTC GCCAAGATGC TCAAGCGCAA GGACGACATC
GTCGGCAAGA TGACCAAGGG CATCGAGTTC CTGTTCCGCA AGAACAAGGT GACGCTGCTC
AAGGGCCACG GCAAGTTCGT CGGCAAGACC GACGCCGGCT ACCAGGTCGA GATCGCGGGC
AAGGCCGGCA CGGAAGTCGT GACCGCCAAG CACGTGATCA TCGCCACCGG CTCGAAGGCC
CGCCACCTGC CGGGCGTGCC GGTCGACAAC GTGACCATCG CCGACAACGA AGGCGCGCTG
AAGTTCGGCG AAGTGCCGAA GAAGCTGGGC GTGATCGGCG CCGGCGTGAT CGGCCTGGAG
CTGGGCTCGG TGTGGCGTCG CCTGGGTTCT GACGTGACGA TTCTCGAAGC ACTGCCGAGC
TTCCTCGGCG CGGCTGACGA GTCGGTCGCC AAGGAAGCCA ACAAGCTGCT GAACAAGCAG
GGCCTGAAGA TCAACGTCGG CGTCAAGGTC GGCGAGATCG AATCGTCGGC CAAGGGCGTC
AAGGTGAACT ACACCGACGC CACCGGCGCC GCCCAGGTGC TGGAGTGCGA CAAGCTGATC
GTCTCGATCG GCCGCGTGCC GAACACCGAC AACCTGGGCC TGGACGCGAT CGGCCTGGCG
ACGGATCAGC GCGGCTTCAT CGAAGTGGAC GACCACTGCG CGACCAAGCT GCCGAACCTG
TGGGCGATCG GCGACGTGGT GCGCGGCCCG ATGCTGGCGC ACAAGGCCGA AGACGAAGGC
GTGGCCGTGG CCGAGCGCAT CGTCGGCCAG AAGCCGCACA TCGACTACAA CTGCATTCCG
TGGGTGATCT ACACCTTCCC GGAAATCGCC TGGGTCGGCA AGACCGAGCA GCAGCTCAAG
GCCGAGGGCC GTGAGATCAA GGCGGGCCAG TTCCCGTTCA TGGCCAACGG CCGCGCGCTG
GGCATGGGCG CGTCCGACGG CTTCGTCAAG GTGATCGCCG ACGCCAAGAC CGACGAGATC
CTGGGCGTGC ACGTGGTGGC CGCCAACGCG TCGGACCTGA TCGCCGAAGC CGTGGTGGCG
ATGGAGTTCA AGGCCGCGGC GGAAGACATC GGCCGCATCT GCCACCCGCA CCCGTCGATG
TCCGAAGTGA TGCGCGAGGC CGCGCTGGCC GTCGACAAGC GTCAGCTGAA CATGTAA
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| Protein sequence | MSKQFDVLVI GAGPGGYIAA IRAGQLGLNV ACCEDNAYDD PKGEPRLGGT CLNVGCIPSK
ALLASSEEFE NVNHHLADHG ITVDGARVDV AKMLKRKDDI VGKMTKGIEF LFRKNKVTLL
KGHGKFVGKT DAGYQVEIAG KAGTEVVTAK HVIIATGSKA RHLPGVPVDN VTIADNEGAL
KFGEVPKKLG VIGAGVIGLE LGSVWRRLGS DVTILEALPS FLGAADESVA KEANKLLNKQ
GLKINVGVKV GEIESSAKGV KVNYTDATGA AQVLECDKLI VSIGRVPNTD NLGLDAIGLA
TDQRGFIEVD DHCATKLPNL WAIGDVVRGP MLAHKAEDEG VAVAERIVGQ KPHIDYNCIP
WVIYTFPEIA WVGKTEQQLK AEGREIKAGQ FPFMANGRAL GMGASDGFVK VIADAKTDEI
LGVHVVAANA SDLIAEAVVA MEFKAAAEDI GRICHPHPSM SEVMREAALA VDKRQLNM
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