Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1269 |
Symbol | sucA |
ID | 1220092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1348620 |
End bp | 1351481 |
Gene Length | 2862 bp |
Protein Length | 953 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637237646 |
Product | 2-oxoglutarate dehydrogenase E1 component |
Protein accession | NP_519390 |
Protein GI | 17545988 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGC TGTACAAGCA GTATCTGGAC ACTTCGTACC TGTCCGGCGG CAATGCCGCA TACGTTGAAG ACCAGTACGA AGCCTATCTC CAGGATCCCA CTTCCGTCAG CGAGGCTCTG CGCGCGTATT TCGATGCGCT GCAGAACATC CCCGCCGTCG ACGGCTCCAA CGCCCGGGAT ATCGCCCACG CCCCCATCGT TACGTCGTTC GCTGAGCGCG CCAAGCAAGG CCCGATCAAG ACGATCGTCG CGTCTGCCGA TTCCGACATG GGCCGCAAGC GCGTGTCCGC GACGCAGCTG GTCGCCGCCT ACCGCAACGT GGGCCTGCGC TGGGCCGACC TGGATCCGCT CAAGCGTCAG GAGCGCCCGC CGGTGCCGGA TCTGGACCCG GCCTTCTACG GTTTCACCGA AGCCGATCAG GACATCGTCT TCAACGCCAG CAACACGTAC TTCGGCAAGG AAACGATGAG CCTGCGCGAG CTGCTCAACA ACCTGCGCGA AACGTATTGC GGCTCGATCG GCGCCGAATT CATGTACGTC AGCGACCAGG CGCAGAAGCG CTGGTGGCAG GAGCGCCTGG AGAGCATCCG CTCCAAGCCG ACCTTCTCCG CTGAAAAGAA GAAGCACATC CTGGAGCGCC TGACGGCCGC CGAAGGCCTC GAGCGCTTCC TCCACACCAA GTACGTCGGC CAGAAACGTT TCTCGCTCGA AGGCGGCGAG AGCTTCATCG CGGCGATGGA CGAACTGATC CAGCACGCCG GCGAGAAGGG CGTGCAGGAA ATCGTGATCG GCATGGCCCA CCGCGGCCGC CTGAACGTGC TGGTCAACAC GCTGGGCAAG ATGCCGGCGG ACCTGTTTGC CGAATTCGAA GGCAAGCACG TGGACGACCT GCCGGCCGGC GACGTGAAGT ACCACAAGGG CTTCTCGAGC GACGTCACGA CCCTGGGCGG CCCCGTCCAC CTGTCGCTGG CGTTCAACCC GTCGCACCTG GAAATCGTCA ACCCGGTGGT GGAAGGTTCG GTCAAGGCGC GCCAGGAACG CCGCGGCGAC AAGACCGGCG AGCAGGTGCT GGCCGTGCAG GTGCACGGTG ACGCGGCCTT CGCCGGCCAG GGCGTCGTGA TGGAAACGCT CAACCTCGCG CAGACGCGCG GCTACGGCAC GGGCGGCACC ATCCACATCG TCATCAACAA CCAGATCGGC TTCACCACCT CCGACCCGCG CGACTCGCGT TCCACGCTGT ACTGCACGGA CGTGGTCAAG ATGATCGAAG CGCCGGTGCT GCACGTGAAC GGCGACGATC CGGAAGCCGT CGTGCTGGCC ATGCAGCTGG CGATCGACTT CCGCACCGAG TTCAAGAAAG ACGTCGCGGT CGACATCATC TGCTTCCGCA AGCTCGGCCA CAACGAGCAG GACACGCCGG CGATGACGCA GCCGCTGATG TACAAGAAGA TCGGCCAGCA CCCCGGCACG CGCAAGCTGT ACGCAGACAA GCTCGTCACG CAGAGCACCC TGAAGACCGA GGAGCCGGAC GGCCTGGTGC AGGAATACCG CGCCGCCATG GACGCCGGCA AGCACACGGT CGACCCGGTG CTGTCGAACT TCAAGAACAA GTTCGCGGTG GACTGGCTGC CGTTCCTGAA CCGCAAGTGG ACGGACTCGG CCGATACCGC CGTGCCGATG GCCGAACTCA AGCGCCTGGC CGAGCGCATC ACCGCCATCC CCGACCACTT CAAGGTGCAC CCGCTGGTCG AGCGCGTGGT CAACGACCGC GCCAAGATGG GCCAGGGCGA GCAGGCGCTG GACTGGGGCA TGGGCGAGCA TCTGGCCTTC GCCTCGCTGG TGGCTTCGGG CTACCCGGTG CGCATCACCG GCCAGGACGC CGGCCGCGGC ACGTTCACGC ACCGCCACGC CGTGCTGCAC GACCAGAACC GCGAGCGCTG GGACGCCGGC TCGTACATCC CGCTGCAGAA CGTGTCGGAC AACCAGGCAC CGTTCACCGT GATCGACTCG GTGCTGTCCG AAGAGGCCGT GATGGGCTTC GAGTACGGCT ATTCGTCGGC CGAGCCGAAC ACCCTGGTGA TCTGGGAAGC CCAGTTCGGC GACTTCGCCA ACGGCGCGCA GGTCGTGATC GACCAGTTCA TCTCGTCGGG TGAAGTGAAG TGGGGCCGTG CCTCGGGCCT GACGCTGATG CTGCCGCACG GCTACGAAGG CCAGGGTCCG GAGCACAGCT CGGCGCGCAT GGAGCGCTAC CTGCAGCTGT GCGCCGACCA CAACATGCAA GTGGTGCAGC CGACCACGCC GGCTCAGATC TTCCACCTGC TGCGCCGCCA GATGATCCGC CTGTTCCGTA AGCCGCTGAT CATCATGACG CCGAAGTCGT TGCTGCGCAG CAAGGACGCC GTGTCGCCGC TGACCGATCT GGCCAAGGGC CACTTCGAGA CGGTCATCGC CGATCACGAA GAGCTGAACG CGGCCAAGGT CAAGCGCATC GTGGCCTGCT CGGGCAAGGT CTACTACGAC CTGGTCAACG CGCGCAAGGA ACGTGGCCTG ACCGACACCG CCATCATCCG TGTCGAGCAG CTGTATCCGT TCCCGCACAA GGCGTTCGCG GCCGAGCTCA AGAAGTACCC GAACCTCGCC GAAGTGGTGT GGTGCCAGGA TGAGCCGCAG AACCAGGGCG CTTGGTTCTT CGTGCAGCAC TACATCATGG AGAACATGAG CGAGGGCCAG AAGCTGGGCT ACGCTGGCCG TCCGGCCTCG GCTTCGCCGG CCGTGGGCTA CTACGCCAAG CACAACGAGC AGCAGAAGGC GCTGATCGAT GCCGCTTTCG CCAAGCTCAA GGGCTTCGTG CTGACCAAGT AA
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Protein sequence | MTELYKQYLD TSYLSGGNAA YVEDQYEAYL QDPTSVSEAL RAYFDALQNI PAVDGSNARD IAHAPIVTSF AERAKQGPIK TIVASADSDM GRKRVSATQL VAAYRNVGLR WADLDPLKRQ ERPPVPDLDP AFYGFTEADQ DIVFNASNTY FGKETMSLRE LLNNLRETYC GSIGAEFMYV SDQAQKRWWQ ERLESIRSKP TFSAEKKKHI LERLTAAEGL ERFLHTKYVG QKRFSLEGGE SFIAAMDELI QHAGEKGVQE IVIGMAHRGR LNVLVNTLGK MPADLFAEFE GKHVDDLPAG DVKYHKGFSS DVTTLGGPVH LSLAFNPSHL EIVNPVVEGS VKARQERRGD KTGEQVLAVQ VHGDAAFAGQ GVVMETLNLA QTRGYGTGGT IHIVINNQIG FTTSDPRDSR STLYCTDVVK MIEAPVLHVN GDDPEAVVLA MQLAIDFRTE FKKDVAVDII CFRKLGHNEQ DTPAMTQPLM YKKIGQHPGT RKLYADKLVT QSTLKTEEPD GLVQEYRAAM DAGKHTVDPV LSNFKNKFAV DWLPFLNRKW TDSADTAVPM AELKRLAERI TAIPDHFKVH PLVERVVNDR AKMGQGEQAL DWGMGEHLAF ASLVASGYPV RITGQDAGRG TFTHRHAVLH DQNRERWDAG SYIPLQNVSD NQAPFTVIDS VLSEEAVMGF EYGYSSAEPN TLVIWEAQFG DFANGAQVVI DQFISSGEVK WGRASGLTLM LPHGYEGQGP EHSSARMERY LQLCADHNMQ VVQPTTPAQI FHLLRRQMIR LFRKPLIIMT PKSLLRSKDA VSPLTDLAKG HFETVIADHE ELNAAKVKRI VACSGKVYYD LVNARKERGL TDTAIIRVEQ LYPFPHKAFA AELKKYPNLA EVVWCQDEPQ NQGAWFFVQH YIMENMSEGQ KLGYAGRPAS ASPAVGYYAK HNEQQKALID AAFAKLKGFV LTK
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