Gene RSc1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1269 
SymbolsucA 
ID1220092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1348620 
End bp1351481 
Gene Length2862 bp 
Protein Length953 aa 
Translation table11 
GC content65% 
IMG OID637237646 
Product2-oxoglutarate dehydrogenase E1 component 
Protein accessionNP_519390 
Protein GI17545988 
COG category[C] Energy production and conversion 
COG ID[COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 
TIGRFAM ID[TIGR00239] 2-oxoglutarate dehydrogenase, E1 component 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC TGTACAAGCA GTATCTGGAC ACTTCGTACC TGTCCGGCGG CAATGCCGCA 
TACGTTGAAG ACCAGTACGA AGCCTATCTC CAGGATCCCA CTTCCGTCAG CGAGGCTCTG
CGCGCGTATT TCGATGCGCT GCAGAACATC CCCGCCGTCG ACGGCTCCAA CGCCCGGGAT
ATCGCCCACG CCCCCATCGT TACGTCGTTC GCTGAGCGCG CCAAGCAAGG CCCGATCAAG
ACGATCGTCG CGTCTGCCGA TTCCGACATG GGCCGCAAGC GCGTGTCCGC GACGCAGCTG
GTCGCCGCCT ACCGCAACGT GGGCCTGCGC TGGGCCGACC TGGATCCGCT CAAGCGTCAG
GAGCGCCCGC CGGTGCCGGA TCTGGACCCG GCCTTCTACG GTTTCACCGA AGCCGATCAG
GACATCGTCT TCAACGCCAG CAACACGTAC TTCGGCAAGG AAACGATGAG CCTGCGCGAG
CTGCTCAACA ACCTGCGCGA AACGTATTGC GGCTCGATCG GCGCCGAATT CATGTACGTC
AGCGACCAGG CGCAGAAGCG CTGGTGGCAG GAGCGCCTGG AGAGCATCCG CTCCAAGCCG
ACCTTCTCCG CTGAAAAGAA GAAGCACATC CTGGAGCGCC TGACGGCCGC CGAAGGCCTC
GAGCGCTTCC TCCACACCAA GTACGTCGGC CAGAAACGTT TCTCGCTCGA AGGCGGCGAG
AGCTTCATCG CGGCGATGGA CGAACTGATC CAGCACGCCG GCGAGAAGGG CGTGCAGGAA
ATCGTGATCG GCATGGCCCA CCGCGGCCGC CTGAACGTGC TGGTCAACAC GCTGGGCAAG
ATGCCGGCGG ACCTGTTTGC CGAATTCGAA GGCAAGCACG TGGACGACCT GCCGGCCGGC
GACGTGAAGT ACCACAAGGG CTTCTCGAGC GACGTCACGA CCCTGGGCGG CCCCGTCCAC
CTGTCGCTGG CGTTCAACCC GTCGCACCTG GAAATCGTCA ACCCGGTGGT GGAAGGTTCG
GTCAAGGCGC GCCAGGAACG CCGCGGCGAC AAGACCGGCG AGCAGGTGCT GGCCGTGCAG
GTGCACGGTG ACGCGGCCTT CGCCGGCCAG GGCGTCGTGA TGGAAACGCT CAACCTCGCG
CAGACGCGCG GCTACGGCAC GGGCGGCACC ATCCACATCG TCATCAACAA CCAGATCGGC
TTCACCACCT CCGACCCGCG CGACTCGCGT TCCACGCTGT ACTGCACGGA CGTGGTCAAG
ATGATCGAAG CGCCGGTGCT GCACGTGAAC GGCGACGATC CGGAAGCCGT CGTGCTGGCC
ATGCAGCTGG CGATCGACTT CCGCACCGAG TTCAAGAAAG ACGTCGCGGT CGACATCATC
TGCTTCCGCA AGCTCGGCCA CAACGAGCAG GACACGCCGG CGATGACGCA GCCGCTGATG
TACAAGAAGA TCGGCCAGCA CCCCGGCACG CGCAAGCTGT ACGCAGACAA GCTCGTCACG
CAGAGCACCC TGAAGACCGA GGAGCCGGAC GGCCTGGTGC AGGAATACCG CGCCGCCATG
GACGCCGGCA AGCACACGGT CGACCCGGTG CTGTCGAACT TCAAGAACAA GTTCGCGGTG
GACTGGCTGC CGTTCCTGAA CCGCAAGTGG ACGGACTCGG CCGATACCGC CGTGCCGATG
GCCGAACTCA AGCGCCTGGC CGAGCGCATC ACCGCCATCC CCGACCACTT CAAGGTGCAC
CCGCTGGTCG AGCGCGTGGT CAACGACCGC GCCAAGATGG GCCAGGGCGA GCAGGCGCTG
GACTGGGGCA TGGGCGAGCA TCTGGCCTTC GCCTCGCTGG TGGCTTCGGG CTACCCGGTG
CGCATCACCG GCCAGGACGC CGGCCGCGGC ACGTTCACGC ACCGCCACGC CGTGCTGCAC
GACCAGAACC GCGAGCGCTG GGACGCCGGC TCGTACATCC CGCTGCAGAA CGTGTCGGAC
AACCAGGCAC CGTTCACCGT GATCGACTCG GTGCTGTCCG AAGAGGCCGT GATGGGCTTC
GAGTACGGCT ATTCGTCGGC CGAGCCGAAC ACCCTGGTGA TCTGGGAAGC CCAGTTCGGC
GACTTCGCCA ACGGCGCGCA GGTCGTGATC GACCAGTTCA TCTCGTCGGG TGAAGTGAAG
TGGGGCCGTG CCTCGGGCCT GACGCTGATG CTGCCGCACG GCTACGAAGG CCAGGGTCCG
GAGCACAGCT CGGCGCGCAT GGAGCGCTAC CTGCAGCTGT GCGCCGACCA CAACATGCAA
GTGGTGCAGC CGACCACGCC GGCTCAGATC TTCCACCTGC TGCGCCGCCA GATGATCCGC
CTGTTCCGTA AGCCGCTGAT CATCATGACG CCGAAGTCGT TGCTGCGCAG CAAGGACGCC
GTGTCGCCGC TGACCGATCT GGCCAAGGGC CACTTCGAGA CGGTCATCGC CGATCACGAA
GAGCTGAACG CGGCCAAGGT CAAGCGCATC GTGGCCTGCT CGGGCAAGGT CTACTACGAC
CTGGTCAACG CGCGCAAGGA ACGTGGCCTG ACCGACACCG CCATCATCCG TGTCGAGCAG
CTGTATCCGT TCCCGCACAA GGCGTTCGCG GCCGAGCTCA AGAAGTACCC GAACCTCGCC
GAAGTGGTGT GGTGCCAGGA TGAGCCGCAG AACCAGGGCG CTTGGTTCTT CGTGCAGCAC
TACATCATGG AGAACATGAG CGAGGGCCAG AAGCTGGGCT ACGCTGGCCG TCCGGCCTCG
GCTTCGCCGG CCGTGGGCTA CTACGCCAAG CACAACGAGC AGCAGAAGGC GCTGATCGAT
GCCGCTTTCG CCAAGCTCAA GGGCTTCGTG CTGACCAAGT AA
 
Protein sequence
MTELYKQYLD TSYLSGGNAA YVEDQYEAYL QDPTSVSEAL RAYFDALQNI PAVDGSNARD 
IAHAPIVTSF AERAKQGPIK TIVASADSDM GRKRVSATQL VAAYRNVGLR WADLDPLKRQ
ERPPVPDLDP AFYGFTEADQ DIVFNASNTY FGKETMSLRE LLNNLRETYC GSIGAEFMYV
SDQAQKRWWQ ERLESIRSKP TFSAEKKKHI LERLTAAEGL ERFLHTKYVG QKRFSLEGGE
SFIAAMDELI QHAGEKGVQE IVIGMAHRGR LNVLVNTLGK MPADLFAEFE GKHVDDLPAG
DVKYHKGFSS DVTTLGGPVH LSLAFNPSHL EIVNPVVEGS VKARQERRGD KTGEQVLAVQ
VHGDAAFAGQ GVVMETLNLA QTRGYGTGGT IHIVINNQIG FTTSDPRDSR STLYCTDVVK
MIEAPVLHVN GDDPEAVVLA MQLAIDFRTE FKKDVAVDII CFRKLGHNEQ DTPAMTQPLM
YKKIGQHPGT RKLYADKLVT QSTLKTEEPD GLVQEYRAAM DAGKHTVDPV LSNFKNKFAV
DWLPFLNRKW TDSADTAVPM AELKRLAERI TAIPDHFKVH PLVERVVNDR AKMGQGEQAL
DWGMGEHLAF ASLVASGYPV RITGQDAGRG TFTHRHAVLH DQNRERWDAG SYIPLQNVSD
NQAPFTVIDS VLSEEAVMGF EYGYSSAEPN TLVIWEAQFG DFANGAQVVI DQFISSGEVK
WGRASGLTLM LPHGYEGQGP EHSSARMERY LQLCADHNMQ VVQPTTPAQI FHLLRRQMIR
LFRKPLIIMT PKSLLRSKDA VSPLTDLAKG HFETVIADHE ELNAAKVKRI VACSGKVYYD
LVNARKERGL TDTAIIRVEQ LYPFPHKAFA AELKKYPNLA EVVWCQDEPQ NQGAWFFVQH
YIMENMSEGQ KLGYAGRPAS ASPAVGYYAK HNEQQKALID AAFAKLKGFV LTK