| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1254 |
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| Symbol | |
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| ID | 1220077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1332977 |
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| End bp | 1333951 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237631 |
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| Product | hypothetical protein |
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| Protein accession | NP_519375 |
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| Protein GI | 17545973 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.757696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACT GGGTCGCCGA CACCTTCACC CAAGCGCAGG ACCTGCTGTT CCAGCATGTC
GTGATGCCGC TCACCTATGC CATCGGCATG GGCGGCTACG TGGAGGATGC CTATCCCGGC
ACCGAATGGC TGCTGATGGG CCTGGTGCAG ATTGCCGTGA TGCTGCTGGT GCTGCGGCCG
CTGGAGCGCT GGCGCCCCGT GGAGCCGATG CAGGATCGCG GCGCCGTGCG GGCGGACATC
GTCTACACGC TGTTCCACCG GCTCGGCCTG TTCCCGCTGC TGCTGTTCTT CACGCTGCAG
CCGCTGATCG ACGCGCTCGA CGGCAAGCTG CGCTTCTGGG GCTGGGCCCA CCTGAACGTG
GAGGACTGGT GGCCCGGCGT GACCTCCATC CCCATCGTCA GCTTCCTGGT CTACCTGGTG
CTGTTCGACC TGCTCGACTA CGCGTACCAC CGCCTGTCGC ACACCTTCCA CTGGTGGTGG
AACCTGCACG CGCTGCACCA CAGCCAGCAG CAGATGACAC TGTGGTCCGA CGACCGCAAT
CACCTCTTCG ACGATCTGCT GCACGGCACG GTGTTCGCCG TCGCGGCATT GGTGATCGGC
GTGGAGCCGT CGCAGTACGT GCTGCTGGTC GCCATCTCGC AGTTGCTGCA GAGCCTGCAG
CACGCCAATG TGCGGCTGCA TTTCGGCTGG CTGGGCGATC GGCTGCTGAT CTCGCCCCGC
TTCCATCGGC TGCACCACGC CATCGGCCTG GGGCACGAGG TGCCGGGCAA GCCGGGCGTG
CTGGGCGGTT GCAATTTCGG CGTGCTGTTC CCGTGGTGGG ACATGCTGCT CGGCACCGCC
GTCTTCTCGC CCGAATACCA CGCCACCGGC ATCCGCGACC AGCTGCCCGC GCCGCGCGGC
CGCTCGCGCG ACTACGGGCG CGGCGTGCTG CGCCAGCAGT GGCTGGGCGT CAAGCGCCTG
CTCGGCCGCG CCTGA
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| Protein sequence | MFDWVADTFT QAQDLLFQHV VMPLTYAIGM GGYVEDAYPG TEWLLMGLVQ IAVMLLVLRP
LERWRPVEPM QDRGAVRADI VYTLFHRLGL FPLLLFFTLQ PLIDALDGKL RFWGWAHLNV
EDWWPGVTSI PIVSFLVYLV LFDLLDYAYH RLSHTFHWWW NLHALHHSQQ QMTLWSDDRN
HLFDDLLHGT VFAVAALVIG VEPSQYVLLV AISQLLQSLQ HANVRLHFGW LGDRLLISPR
FHRLHHAIGL GHEVPGKPGV LGGCNFGVLF PWWDMLLGTA VFSPEYHATG IRDQLPAPRG
RSRDYGRGVL RQQWLGVKRL LGRA
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