| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1253 |
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| Symbol | |
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| ID | 1220076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1332154 |
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| End bp | 1332975 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237630 |
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| Product | lipoprotein signal peptide |
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| Protein accession | NP_519374 |
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| Protein GI | 17545972 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.651554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.894371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCCG TTCTGCCGAT GCTGCGCTCG GTGGCCGCCG CCGTGGCCCT CGGAGCCTGC
GCGTTCGCCG TGGCGGCGCC GGGCGGCGTC AATGCGGGCG CGTGCAAGGG CACGGTCTAC
CTGACGTTCG ACACCGGCAG CATGAGCCAG GCTCAGCTGA TTGCCGACAC GCTGCGCCGG
CACCGCATCC GGGCCACTTT CTTCCTCGCC AACGAACAGA CCATCCACGG CGACAGCACG
CTCGACGACG CCTGGGCGCC GTACTGGAAG TCGCTCGCCG CCGATGGCCA CGCCTTCGGC
ACGCATACCT TCGATCACGT CTACTACAAG GGCGAGGCCG GTCCGGACAA GGTCCGCTTC
CGCCCGCAGT TCGGCGCGCA GGGCGGCCGC AATGTCGTCT GGGGCGAGCC GGAATTCTGC
GCCGAGCTCA AGCGCAGCGC CGATCGCTTC CATGCCATGA CCGGCCAGCC GATCGACCCG
CTGTGGCGCG CGCCGGGCGG TCACCTGTCG GCCGTCACCG AGGGCTGGGC CAAGCAGTGC
GGCTTCGCGC ATGTGGCGTG GGCCCCGGCC GGCTTCCTCG GCGACGAGCT GCCCTCCGAG
CGCTATCCGA ACGCCATGCT GCTCGACAAG GCCCTGGCCA ACCTGCGCGA CGGCGACATC
ACCATGGCCC ACCTGGGCAT CTGGTCGCGC AAGGACCCGT GGGCCCCGGC CGACCTGGAG
CCGCTGATCA CCGGCCTGGA GCGCAAGGGC TTCTGCTTCG CCACGCTGCG CGACCATCCG
CAGTACCAGG CGTGGTTCGC CGCCCACCCG CCGGCCCGCT GA
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| Protein sequence | MQSVLPMLRS VAAAVALGAC AFAVAAPGGV NAGACKGTVY LTFDTGSMSQ AQLIADTLRR
HRIRATFFLA NEQTIHGDST LDDAWAPYWK SLAADGHAFG THTFDHVYYK GEAGPDKVRF
RPQFGAQGGR NVVWGEPEFC AELKRSADRF HAMTGQPIDP LWRAPGGHLS AVTEGWAKQC
GFAHVAWAPA GFLGDELPSE RYPNAMLLDK ALANLRDGDI TMAHLGIWSR KDPWAPADLE
PLITGLERKG FCFATLRDHP QYQAWFAAHP PAR
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