| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1252 |
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| Symbol | |
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| ID | 1220075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1331151 |
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| End bp | 1332143 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237629 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_519373 |
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| Protein GI | 17545971 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.603691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.989203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCT CGCGCATTTC GTTTGTTTCC CGTTGGGTTT CGCTGCTGGC GCTCTCGGCC
GGTGTGCTCG CGCCGCTTGC CGCACATGCG GAAGTCGTGA CCGTGCTCAA TTCGGGAGAC
GCCAGCGTCA CCCTGATCGA CAAGGATTCA CGCCGGGTGC TGGAGACCTT CCCCATCGGC
AAGGAGCCGC ATCACCTGAT CGCCACGCCG GACGAGAAGT CGCTGATCGT CGCCAACGCG
GTCGGCAACG AGCTGGTGTT CCTCGACCCG GTTACCGGCA AGATCCAGCA GCGCGTGCCG
CGCATCGACG ATCCGTACCA GATCGGTTTC TCGCCCGACC AGAAATGGTT CCTGACCACC
GGCAACCGCC TTGACCGCGT CGACATCTAC CGCTGGGACG GCCACGCGCT GACCATCGCC
AAGCAGTTGC CGCTGGCCAA GACGCCCAGC CACATCGCCT TCACCGCCGA CAGCAAGGTG
GCGTTCGTGA CGCTGCAGGA TTCCAACGAA GTGGTCGCCA TCGACCTGCC CACGCAGACC
GTGATGTGGC GCATGACCTC CGGCGCCGCG CCCGCCGGCG TGTGGGTGAC CACCGACCAG
AAATACCTGC TGGTCGGCAT GACCGGCGCG GATTTCGTCG AGGTCATCGA CTGGCGCAAC
CGCACCAGCG TCAAGCGCAT CCCCACCGGC AAGGGCGCCC ACAACTTCCG CGCGCTGGGC
GACAAGCGGC ACCTGTTCCT GTCCAACCGC GTCTCGGGCA CCATCAGCAT CATCGACGAG
CAGACGCTCA CCAAGGTGGG CGACATCACC GGCCTGCCGC CGGGCCCGGA CGACATGGAG
CTGACCGCCG ACGGCAAGCA GCTGTGGGTG ACCTGCCGCT GGGCCAAGCG CGTGGCGATC
GTCGACGTGG CCAGCCGCAA GGTGGTCGAA GAAATCAAGG TGGGGCGCTC GCCGCACGGC
ATCTATTTCC GCACGCGCGC GCCGCTGATC TGA
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| Protein sequence | MSASRISFVS RWVSLLALSA GVLAPLAAHA EVVTVLNSGD ASVTLIDKDS RRVLETFPIG
KEPHHLIATP DEKSLIVANA VGNELVFLDP VTGKIQQRVP RIDDPYQIGF SPDQKWFLTT
GNRLDRVDIY RWDGHALTIA KQLPLAKTPS HIAFTADSKV AFVTLQDSNE VVAIDLPTQT
VMWRMTSGAA PAGVWVTTDQ KYLLVGMTGA DFVEVIDWRN RTSVKRIPTG KGAHNFRALG
DKRHLFLSNR VSGTISIIDE QTLTKVGDIT GLPPGPDDME LTADGKQLWV TCRWAKRVAI
VDVASRKVVE EIKVGRSPHG IYFRTRAPLI
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