Gene RSc1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1248 
Symbol 
ID1220071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1323318 
End bp1324490 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content68% 
IMG OID637237625 
Producthypothetical protein 
Protein accessionNP_519369 
Protein GI17545967 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG GACAGATCCG GCTCGGCCAT TCGATGCCCT GGGGCATGGT CGGTGGCGGG 
CAGGGCAGCC AGATCGGCTA TATCCACCGC TCGGCCGCGC TGCGCGACGG CAGCTTCCAG
CTCGTTGCCG GCGCATTCGA TCTCGACCCG GAGCGTGGCC GCCAATTCGG CCAGCGGCTG
GGTGTGAGCG CGCAGCGCTG TTACCCGGAC TACCGGGCCA TGTTCGAGGC GGAGGCACGC
CGCCCGGACG GCATCCGCGC CGTCTCGATC GCGACGCCGA ACAACACGCA CTTCGACATC
TGCCGGGCCG CGCTCCATGC GGGGCTGCAC GTGGTCTGCG AAAAGCCGCT GTGCTTCACG
ACCGCCGAGG CGGAGGCACT GCAGCGCCTG GCCGGCGAAC AGCGCAAGAT CGTCGGCGTG
ACCTACGGCT ACGCCGGCCA TCAGTTGATC GAGCACGCGC GCGAGATGAT CGTGCGCGGC
GACCTCGGTG AGATCCGCAT CGTGCAGATG CAGTTCTCGC ACGGTTTCCA CAGCGAAGGC
GTCGAAGCCG CGAACCCGGC CGCCCGCTGG CGCATGGACC CGACCTTCGC CGGCCCGAGC
TACGTGCTCG GCGACATCGG CACGCATCCG CTCTACCTGT CCGAAGTGAT GCTGCCCGGG
CTGAAGATCG CGCGGCTGCT GTGCTCGCGG CAGAGCTTCG TGAAGACCCG CGCGCCGCTG
GAGGACAACG CGTTCACCAT CATGGAATAC CAGGGCGGCG CGATCGGCTA TGCCTGGTCA
TGCGCGGTGA ACGCCGGTTC GATGCATGGC CAGAAGATCC GCGTGATCGG CTCGAAGGCG
AGCCTGGAAT GGTGGGACGA GCACCCGAAC CAGCTGCGCT ACGAGGTCCA GGGACAGCCG
GCGCAGGTGC TCGATCGCGG CATGGGCTAT CTGCATCCGG CGGCACTGCA CGACGACCGC
ATTGGAGCGG GGCACCCGGA AGGGCTGTTC GAGGCATGGT CGAACCTCTA TTACCGGTTC
GCGCTCGCGA TGGATGCGAC CGACCGCGAC GACGCGGCGG CATTGCGTGG TATCCGCTAT
CCGGACATCC ATGCGGGCGT CGAGGGCGTG CGCTGGGTGG AGAACTGCGT GCGTTCGGCC
GATGCGGGCG GCGTGTGGGT CGACTATCGT TGA
 
Protein sequence
MIDGQIRLGH SMPWGMVGGG QGSQIGYIHR SAALRDGSFQ LVAGAFDLDP ERGRQFGQRL 
GVSAQRCYPD YRAMFEAEAR RPDGIRAVSI ATPNNTHFDI CRAALHAGLH VVCEKPLCFT
TAEAEALQRL AGEQRKIVGV TYGYAGHQLI EHAREMIVRG DLGEIRIVQM QFSHGFHSEG
VEAANPAARW RMDPTFAGPS YVLGDIGTHP LYLSEVMLPG LKIARLLCSR QSFVKTRAPL
EDNAFTIMEY QGGAIGYAWS CAVNAGSMHG QKIRVIGSKA SLEWWDEHPN QLRYEVQGQP
AQVLDRGMGY LHPAALHDDR IGAGHPEGLF EAWSNLYYRF ALAMDATDRD DAAALRGIRY
PDIHAGVEGV RWVENCVRSA DAGGVWVDYR