Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1248 |
Symbol | |
ID | 1220071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1323318 |
End bp | 1324490 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237625 |
Product | hypothetical protein |
Protein accession | NP_519369 |
Protein GI | 17545967 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACG GACAGATCCG GCTCGGCCAT TCGATGCCCT GGGGCATGGT CGGTGGCGGG CAGGGCAGCC AGATCGGCTA TATCCACCGC TCGGCCGCGC TGCGCGACGG CAGCTTCCAG CTCGTTGCCG GCGCATTCGA TCTCGACCCG GAGCGTGGCC GCCAATTCGG CCAGCGGCTG GGTGTGAGCG CGCAGCGCTG TTACCCGGAC TACCGGGCCA TGTTCGAGGC GGAGGCACGC CGCCCGGACG GCATCCGCGC CGTCTCGATC GCGACGCCGA ACAACACGCA CTTCGACATC TGCCGGGCCG CGCTCCATGC GGGGCTGCAC GTGGTCTGCG AAAAGCCGCT GTGCTTCACG ACCGCCGAGG CGGAGGCACT GCAGCGCCTG GCCGGCGAAC AGCGCAAGAT CGTCGGCGTG ACCTACGGCT ACGCCGGCCA TCAGTTGATC GAGCACGCGC GCGAGATGAT CGTGCGCGGC GACCTCGGTG AGATCCGCAT CGTGCAGATG CAGTTCTCGC ACGGTTTCCA CAGCGAAGGC GTCGAAGCCG CGAACCCGGC CGCCCGCTGG CGCATGGACC CGACCTTCGC CGGCCCGAGC TACGTGCTCG GCGACATCGG CACGCATCCG CTCTACCTGT CCGAAGTGAT GCTGCCCGGG CTGAAGATCG CGCGGCTGCT GTGCTCGCGG CAGAGCTTCG TGAAGACCCG CGCGCCGCTG GAGGACAACG CGTTCACCAT CATGGAATAC CAGGGCGGCG CGATCGGCTA TGCCTGGTCA TGCGCGGTGA ACGCCGGTTC GATGCATGGC CAGAAGATCC GCGTGATCGG CTCGAAGGCG AGCCTGGAAT GGTGGGACGA GCACCCGAAC CAGCTGCGCT ACGAGGTCCA GGGACAGCCG GCGCAGGTGC TCGATCGCGG CATGGGCTAT CTGCATCCGG CGGCACTGCA CGACGACCGC ATTGGAGCGG GGCACCCGGA AGGGCTGTTC GAGGCATGGT CGAACCTCTA TTACCGGTTC GCGCTCGCGA TGGATGCGAC CGACCGCGAC GACGCGGCGG CATTGCGTGG TATCCGCTAT CCGGACATCC ATGCGGGCGT CGAGGGCGTG CGCTGGGTGG AGAACTGCGT GCGTTCGGCC GATGCGGGCG GCGTGTGGGT CGACTATCGT TGA
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Protein sequence | MIDGQIRLGH SMPWGMVGGG QGSQIGYIHR SAALRDGSFQ LVAGAFDLDP ERGRQFGQRL GVSAQRCYPD YRAMFEAEAR RPDGIRAVSI ATPNNTHFDI CRAALHAGLH VVCEKPLCFT TAEAEALQRL AGEQRKIVGV TYGYAGHQLI EHAREMIVRG DLGEIRIVQM QFSHGFHSEG VEAANPAARW RMDPTFAGPS YVLGDIGTHP LYLSEVMLPG LKIARLLCSR QSFVKTRAPL EDNAFTIMEY QGGAIGYAWS CAVNAGSMHG QKIRVIGSKA SLEWWDEHPN QLRYEVQGQP AQVLDRGMGY LHPAALHDDR IGAGHPEGLF EAWSNLYYRF ALAMDATDRD DAAALRGIRY PDIHAGVEGV RWVENCVRSA DAGGVWVDYR
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