Gene RSc1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1237 
SymboliolB 
ID1220060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1309821 
End bp1310636 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID637237614 
Productputative myo-inositol catabolism protein 
Protein accessionNP_519358 
Protein GI17545956 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3718] Uncharacterized enzyme involved in inositol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT CTCCATTGCT GGTCAAGGCG TTGCCGAAGC GCGAGATATG CAATGTCACG 
CCGGAATCCG CCGGCTGGAA GCACGTCGGC TTTCGCGCGC TGCGCCTGGC GGCCGGCGAC
CACGAAACGG TGGAAACCGG TACGCGCGAG CTGTGCGTGG TCGTGCTGAC CGGCACGATC
CGCGCCGAGG TCGACGGCAC CACGTTTGAG GGCCTGGGCA AGCGCGACAG CGTGTTCGAC
GACGTGTCGC CCGATGCCCT GTACGCGCCC GGCGGCAAGA CCGTCACGAT CACCGCCACG
CGCGACGCGG AAGTCGCGCT CTGCACCGCG CCCTGCATCA GCGGCGACAA GGTCGTGCAC
CGCCTCGACG GCGAGCGGAT GCGCCGCACC GTGCGCGGCA GTGGCAGCAA CACCCGCTAC
GTCTGCGACA TCCTGATGGG CGACAACCCG GCGGCCGACC GGCTGCTCGT GGTGGAGGTG
GTGACCCCGG CCGGCCATTC CAGCAGCTAT CCGCCGCACA AGCACGACAG CGCCGCCGAG
CCCGGCGAAA CCGTGCTGGA GGAAACCTAC TACCACCGGC TCAACCCGCC CCAGGGCTTT
GCGTTCCAGC GCGTCTACAC CGATGACCGC AGCCTGGACG AAGCCTGCGC CGTCGAGAAT
CACGACGTCG TCATGGTGCC GCGCGGCTAC CACCCGGTGG TCGCGCCGCA CGGCTACAGC
CTGTATTACC TGAACGTGAT GGCCGGTCCG AGCCGGGCGT GGGCCTTCCG GAACGACCCG
GTCCATGAGT GGATGCTGCG TCCGCCTTCG GACTAA
 
Protein sequence
MTISPLLVKA LPKREICNVT PESAGWKHVG FRALRLAAGD HETVETGTRE LCVVVLTGTI 
RAEVDGTTFE GLGKRDSVFD DVSPDALYAP GGKTVTITAT RDAEVALCTA PCISGDKVVH
RLDGERMRRT VRGSGSNTRY VCDILMGDNP AADRLLVVEV VTPAGHSSSY PPHKHDSAAE
PGETVLEETY YHRLNPPQGF AFQRVYTDDR SLDEACAVEN HDVVMVPRGY HPVVAPHGYS
LYYLNVMAGP SRAWAFRNDP VHEWMLRPPS D