| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1236 |
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| Symbol | |
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| ID | 1220059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1308526 |
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| End bp | 1309635 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237613 |
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| Product | outer membrane porin lipoprotein transmembrane |
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| Protein accession | NP_519357 |
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| Protein GI | 17545955 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA AGGCTAGAAC ATCGCGCCGG CAATGCAGTG CCCAGCGCGT ATCGGTACGC
TTCACCGCGG CTTCGGCGCT TGCCGTCGCT TGCGGTCTTG CCAGCGCCCA AAGCGGCGTC
ACGCTGTATG GACGCGTTGC CGGAGGGATC GACTATACGA ACAAGATCGA CACCGGCAGC
AGCCAATCCG CCGGCAGACT GCAGTACGGC AGCAATCAAT GGGGCACCAG CATGTGGGGC
CTGCGTGCCA GCGAAGACCT CGGGGGCGGC CTGAAGGCGG TGATGAACCT CGAAAACGGC
TTCACTTCCG CCGATGGCGT CGCCTCCGGC GGCCTCTTCA ACCGCTACGC CGTGGCGGGG
CTGTCCAGCA GCACGTACGG GACGCTGCTG GTCGGCCGCG CCATGGGCAT TCCCGACAGC
GAGGTCTACA CGATCGATCC CATGGGGCTG CAATTCATGA GCGCCGCGAC CTTCCAGGGC
AATCGGACGT GGGGGTCGCG CACCAAGGCG ATCACCTACA ACTCGCCGGT CTGGGGCGGC
TGGTCATTCC GCGCCCAAGC CGGGCTGAAC GGCACGGCCG GCAACTTCAA CGCAGGCAGG
CAGCTTGCAG CCAGCATCGG TTACCAGAAC GGCCCGCTCA TGCTCAAAGG ATTCTACGAA
GACATCCGTG ACAGCGCGGG GCAATTCACC AATCTCTACA CGGCATCCCG CCTATATACC
GCGGGCGGGA CCTATCAAAT CGGCGATGCC AAGCTGTTCG GCGGATACAG CCAGATCCAG
TCCAGCGGCA ACACGATCGC GGATGCCGAC AACCCGACCG GCGCGACGCG GCAGCAGACC
TACTGGATCG GGACCAACTA CCAGATGACA CCGGCGGCGA CGCTGGTCGG CGGCGTCTAC
AGGACCCACC GGAACCACGG CGGCGGCACC GGTACGCTGC TGACGTTGGG CGTCAACTAC
GCGTTGTCGA AACGCACGTT GCTGTATGGC ACCGTTGGAA CCGTCCTCAA CGGCAAGCAA
TCGACGTTCT CGGTGGAGGC CAACGGCGGC AAACCCGCAG CGGGCGCCAG CCAGCAAGGG
GTCTACACCG GCATCGTGCA CGTGTTCTGA
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| Protein sequence | MSIKARTSRR QCSAQRVSVR FTAASALAVA CGLASAQSGV TLYGRVAGGI DYTNKIDTGS
SQSAGRLQYG SNQWGTSMWG LRASEDLGGG LKAVMNLENG FTSADGVASG GLFNRYAVAG
LSSSTYGTLL VGRAMGIPDS EVYTIDPMGL QFMSAATFQG NRTWGSRTKA ITYNSPVWGG
WSFRAQAGLN GTAGNFNAGR QLAASIGYQN GPLMLKGFYE DIRDSAGQFT NLYTASRLYT
AGGTYQIGDA KLFGGYSQIQ SSGNTIADAD NPTGATRQQT YWIGTNYQMT PAATLVGGVY
RTHRNHGGGT GTLLTLGVNY ALSKRTLLYG TVGTVLNGKQ STFSVEANGG KPAAGASQQG
VYTGIVHVF
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