Gene RSc1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1231 
Symboltal 
ID1220054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1302347 
End bp1303306 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID637237608 
Producttransaldolase B 
Protein accessionNP_519352 
Protein GI17545950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0164617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGC TCGATCAGCT CAAGCAGTTC ACCACCGTCG TCGCAGATAC CGGCGACTTC 
CAGGCCATGC GCGCCTACGC GCCGCACGAC GCGACCACCA ATCCGTCGCT GATCCTGAAA
GCCGTGCAGA AGGCCGAATA CCGGCCGCTG CTGGAACAGG CCGTGCGCGA TGCCCGCAGC
GACAGCGTGG AAGACATCAT CGACGCCGTG CTGGTGGCGT TCGGCTGCGA AATCCTGTCG
ATCATCCCCG GCCGCGTGTC GACCGAGGTC GACGCGCGCC TGTCGTTCGA CACCGCCGCC
ACGGTGGCCA AGGCCAGGCA CCTGATTGCG CTGTACGAAG CGCGCGGCGT GCCGCGCGAG
CGCGTACTGA TCAAGATCGC CTCCACCTGG GAAGGCATCC GCGCGGCCGA CCAACTGCGC
GCCGAAGGCA TCCGCTGCAA CATGACCCTG CTGTTCTCGC TGATCCAGGC CGTGGCCTGC
GCGGAAGCCG GCGTGCAGCT GATCTCGCCG TTCGTCGGCC GCATCTACGA CTGGTACAAG
AAGGACGCGG GCGCCGCGTG GGACCCGATC GCGCAAGGCG GCGCCAACGA CCCCGGCGTG
CAGTCGGTCG TGCGCATCTA CAACTACTAC AAGCGCTTCG GCTACACGAC CGAAGTGATG
GGCGCGAGCT TCCGCAACAC CTCGCAGATC ATCGAACTGG CCGGCTGCGA CCTGCTGACC
ATCAGCCCCG AGCTGCTCGC CCAGTTGCAG CAGTCCGACG CGCCGGTCGA GCGCAAGCTG
TCGCCGGAGC ACGCGCACGC CACCAACCTC GTCCGCCTGC CCGCCGACGA GGCCGCGTTC
CGCTGGCACA TGAACGCCGA CGCGATGGCC ACCGAAAAGC TGGCCGAAGG CATCCGCCTG
TTCGCGGCGG ATGCGGTCAA GCTGGAAGGT CTGATCGGGC CGCTGCGCGC GGCCGCGTGA
 
Protein sequence
MTQLDQLKQF TTVVADTGDF QAMRAYAPHD ATTNPSLILK AVQKAEYRPL LEQAVRDARS 
DSVEDIIDAV LVAFGCEILS IIPGRVSTEV DARLSFDTAA TVAKARHLIA LYEARGVPRE
RVLIKIASTW EGIRAADQLR AEGIRCNMTL LFSLIQAVAC AEAGVQLISP FVGRIYDWYK
KDAGAAWDPI AQGGANDPGV QSVVRIYNYY KRFGYTTEVM GASFRNTSQI IELAGCDLLT
ISPELLAQLQ QSDAPVERKL SPEHAHATNL VRLPADEAAF RWHMNADAMA TEKLAEGIRL
FAADAVKLEG LIGPLRAAA