Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1231 |
Symbol | tal |
ID | 1220054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1302347 |
End bp | 1303306 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237608 |
Product | transaldolase B |
Protein accession | NP_519352 |
Protein GI | 17545950 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0164617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCAGC TCGATCAGCT CAAGCAGTTC ACCACCGTCG TCGCAGATAC CGGCGACTTC CAGGCCATGC GCGCCTACGC GCCGCACGAC GCGACCACCA ATCCGTCGCT GATCCTGAAA GCCGTGCAGA AGGCCGAATA CCGGCCGCTG CTGGAACAGG CCGTGCGCGA TGCCCGCAGC GACAGCGTGG AAGACATCAT CGACGCCGTG CTGGTGGCGT TCGGCTGCGA AATCCTGTCG ATCATCCCCG GCCGCGTGTC GACCGAGGTC GACGCGCGCC TGTCGTTCGA CACCGCCGCC ACGGTGGCCA AGGCCAGGCA CCTGATTGCG CTGTACGAAG CGCGCGGCGT GCCGCGCGAG CGCGTACTGA TCAAGATCGC CTCCACCTGG GAAGGCATCC GCGCGGCCGA CCAACTGCGC GCCGAAGGCA TCCGCTGCAA CATGACCCTG CTGTTCTCGC TGATCCAGGC CGTGGCCTGC GCGGAAGCCG GCGTGCAGCT GATCTCGCCG TTCGTCGGCC GCATCTACGA CTGGTACAAG AAGGACGCGG GCGCCGCGTG GGACCCGATC GCGCAAGGCG GCGCCAACGA CCCCGGCGTG CAGTCGGTCG TGCGCATCTA CAACTACTAC AAGCGCTTCG GCTACACGAC CGAAGTGATG GGCGCGAGCT TCCGCAACAC CTCGCAGATC ATCGAACTGG CCGGCTGCGA CCTGCTGACC ATCAGCCCCG AGCTGCTCGC CCAGTTGCAG CAGTCCGACG CGCCGGTCGA GCGCAAGCTG TCGCCGGAGC ACGCGCACGC CACCAACCTC GTCCGCCTGC CCGCCGACGA GGCCGCGTTC CGCTGGCACA TGAACGCCGA CGCGATGGCC ACCGAAAAGC TGGCCGAAGG CATCCGCCTG TTCGCGGCGG ATGCGGTCAA GCTGGAAGGT CTGATCGGGC CGCTGCGCGC GGCCGCGTGA
|
Protein sequence | MTQLDQLKQF TTVVADTGDF QAMRAYAPHD ATTNPSLILK AVQKAEYRPL LEQAVRDARS DSVEDIIDAV LVAFGCEILS IIPGRVSTEV DARLSFDTAA TVAKARHLIA LYEARGVPRE RVLIKIASTW EGIRAADQLR AEGIRCNMTL LFSLIQAVAC AEAGVQLISP FVGRIYDWYK KDAGAAWDPI AQGGANDPGV QSVVRIYNYY KRFGYTTEVM GASFRNTSQI IELAGCDLLT ISPELLAQLQ QSDAPVERKL SPEHAHATNL VRLPADEAAF RWHMNADAMA TEKLAEGIRL FAADAVKLEG LIGPLRAAA
|
| |