Gene RSc1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1226 
SymbolpurA 
ID1220048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1295663 
End bp1297003 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content66% 
IMG OID637237602 
Productadenylosuccinate synthetase 
Protein accessionNP_519347 
Protein GI17545945 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000419397 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC CAGCAGTTAG CCAGGGACGC AATGTCGTCG TCATCGGCAC CCAGTGGGGT 
GACGAGGGTA AAGGGAAAAT CGTCGATTGG CTGACCGATC ACGCGCAAGG CGTGGTTCGC
TTCCAGGGCG GACACAACGC AGGCCACACC CTGATCATCG GCGGCAAGAA GACCATTCTG
CGGCTGATCC CGTCGGGCAT CATGCGCGAT GGCGTGGCGT GCTACATCGG TAACGGCGTG
GTGCTGTCGC CCGAGGCGCT GTTCAAGGAA ATCGACGAGC TGGAGTCGGC CGGCGTGGAG
GTCAAGAGCC GCCTGCGGAT CTCCGAGGCG ACCACGCTGA TCCTGCCGTA TCACATCGCC
ATCGATAAGG CGCGCGAGAT CAAGCGCGGT GCCGCCAAGA TCGGCACCAC CGGCCGCGGC
ATCGGTCCGG CGTACGAAGA CAAGGTCGCT CGCCGCGCGC TGCGCGTGCA GGACCTGTTC
GACCCGGCCT ACTTTGCCGA GCGCCTGCGC GAGAACCTCG ATTTCCACAA CTTCGTGCTG
ACACAGTATC TGAACCATCC GGCGCTGGAT TTCCAGCAGA CGCTGGACGA GATGCTGCCG
TACGGCGAGC GCCTCGCGCC GATGGTTACC GACGTGTCGG CCGAGCTGTT TGCGGCCAAC
GCCGCCGGCA AGAACCTCAT GTTCGAAGGC GCGCAGGGCA CGCTGCTCGA CATCGACCAC
GGCACCTATC CGTTCGTCAC CTCCAGCAAC TGCGTGGCCG GCAACGCGGC CGCCGGTGCG
GGCGTGGGGC CGGGTCAGCT GCACTACATC CTGGGGATCA CCAAGGCCTA CTGCACGCGC
GTCGGCTCCG GCCCGTTTCC GAGCGAGCTG TATGACGCCG ACAACCCCGC GCGCCAGGAC
CCGACCGGCG TGCGCCTGGC CAACGTGGGC AAGGAATTCG GCTCGGTCAC GGGCCGTCCG
CGCCGCACCG GCTGGCTGGA TGCCGCCGCG CTGCGCCGCG CGATCCAGAT CAACGGCGTG
TCGGGCCTGT GCATGACCAA GCTGGACGTA CTCGACGGCC TCGAGACCAT CAAGTTGTGC
GTCGGCTACA TGCTGGACGG CAAGTCGATC GACATCCTGC CGCGCGGCTC GGATGCCGTG
GCGCGCTGCC AGCCGGTGTA CGAGGAATTC CCGGGCTGGA ACACGTCGAC CTTCGGTCTG
AAGGAGTGGG ATGCGCTGCC GGAAACCGCG CAGGCCTACC TGAAGCGGGT GGAAGAAGTA
GCCGGCATCC CGATCGCCAT GATCTCGACC GGTCCGGATC GCGACGAGAC CATCCTGCTG
CGTCACCCGT ACAAGGATTG A
 
Protein sequence
MSAPAVSQGR NVVVIGTQWG DEGKGKIVDW LTDHAQGVVR FQGGHNAGHT LIIGGKKTIL 
RLIPSGIMRD GVACYIGNGV VLSPEALFKE IDELESAGVE VKSRLRISEA TTLILPYHIA
IDKAREIKRG AAKIGTTGRG IGPAYEDKVA RRALRVQDLF DPAYFAERLR ENLDFHNFVL
TQYLNHPALD FQQTLDEMLP YGERLAPMVT DVSAELFAAN AAGKNLMFEG AQGTLLDIDH
GTYPFVTSSN CVAGNAAAGA GVGPGQLHYI LGITKAYCTR VGSGPFPSEL YDADNPARQD
PTGVRLANVG KEFGSVTGRP RRTGWLDAAA LRRAIQINGV SGLCMTKLDV LDGLETIKLC
VGYMLDGKSI DILPRGSDAV ARCQPVYEEF PGWNTSTFGL KEWDALPETA QAYLKRVEEV
AGIPIAMIST GPDRDETILL RHPYKD