Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1226 |
Symbol | purA |
ID | 1220048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1295663 |
End bp | 1297003 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637237602 |
Product | adenylosuccinate synthetase |
Protein accession | NP_519347 |
Protein GI | 17545945 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0104] Adenylosuccinate synthase |
TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000419397 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAC CAGCAGTTAG CCAGGGACGC AATGTCGTCG TCATCGGCAC CCAGTGGGGT GACGAGGGTA AAGGGAAAAT CGTCGATTGG CTGACCGATC ACGCGCAAGG CGTGGTTCGC TTCCAGGGCG GACACAACGC AGGCCACACC CTGATCATCG GCGGCAAGAA GACCATTCTG CGGCTGATCC CGTCGGGCAT CATGCGCGAT GGCGTGGCGT GCTACATCGG TAACGGCGTG GTGCTGTCGC CCGAGGCGCT GTTCAAGGAA ATCGACGAGC TGGAGTCGGC CGGCGTGGAG GTCAAGAGCC GCCTGCGGAT CTCCGAGGCG ACCACGCTGA TCCTGCCGTA TCACATCGCC ATCGATAAGG CGCGCGAGAT CAAGCGCGGT GCCGCCAAGA TCGGCACCAC CGGCCGCGGC ATCGGTCCGG CGTACGAAGA CAAGGTCGCT CGCCGCGCGC TGCGCGTGCA GGACCTGTTC GACCCGGCCT ACTTTGCCGA GCGCCTGCGC GAGAACCTCG ATTTCCACAA CTTCGTGCTG ACACAGTATC TGAACCATCC GGCGCTGGAT TTCCAGCAGA CGCTGGACGA GATGCTGCCG TACGGCGAGC GCCTCGCGCC GATGGTTACC GACGTGTCGG CCGAGCTGTT TGCGGCCAAC GCCGCCGGCA AGAACCTCAT GTTCGAAGGC GCGCAGGGCA CGCTGCTCGA CATCGACCAC GGCACCTATC CGTTCGTCAC CTCCAGCAAC TGCGTGGCCG GCAACGCGGC CGCCGGTGCG GGCGTGGGGC CGGGTCAGCT GCACTACATC CTGGGGATCA CCAAGGCCTA CTGCACGCGC GTCGGCTCCG GCCCGTTTCC GAGCGAGCTG TATGACGCCG ACAACCCCGC GCGCCAGGAC CCGACCGGCG TGCGCCTGGC CAACGTGGGC AAGGAATTCG GCTCGGTCAC GGGCCGTCCG CGCCGCACCG GCTGGCTGGA TGCCGCCGCG CTGCGCCGCG CGATCCAGAT CAACGGCGTG TCGGGCCTGT GCATGACCAA GCTGGACGTA CTCGACGGCC TCGAGACCAT CAAGTTGTGC GTCGGCTACA TGCTGGACGG CAAGTCGATC GACATCCTGC CGCGCGGCTC GGATGCCGTG GCGCGCTGCC AGCCGGTGTA CGAGGAATTC CCGGGCTGGA ACACGTCGAC CTTCGGTCTG AAGGAGTGGG ATGCGCTGCC GGAAACCGCG CAGGCCTACC TGAAGCGGGT GGAAGAAGTA GCCGGCATCC CGATCGCCAT GATCTCGACC GGTCCGGATC GCGACGAGAC CATCCTGCTG CGTCACCCGT ACAAGGATTG A
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Protein sequence | MSAPAVSQGR NVVVIGTQWG DEGKGKIVDW LTDHAQGVVR FQGGHNAGHT LIIGGKKTIL RLIPSGIMRD GVACYIGNGV VLSPEALFKE IDELESAGVE VKSRLRISEA TTLILPYHIA IDKAREIKRG AAKIGTTGRG IGPAYEDKVA RRALRVQDLF DPAYFAERLR ENLDFHNFVL TQYLNHPALD FQQTLDEMLP YGERLAPMVT DVSAELFAAN AAGKNLMFEG AQGTLLDIDH GTYPFVTSSN CVAGNAAAGA GVGPGQLHYI LGITKAYCTR VGSGPFPSEL YDADNPARQD PTGVRLANVG KEFGSVTGRP RRTGWLDAAA LRRAIQINGV SGLCMTKLDV LDGLETIKLC VGYMLDGKSI DILPRGSDAV ARCQPVYEEF PGWNTSTFGL KEWDALPETA QAYLKRVEEV AGIPIAMIST GPDRDETILL RHPYKD
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