Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1221 |
Symbol | |
ID | 1220043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1290450 |
End bp | 1291703 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237597 |
Product | hypothetical protein |
Protein accession | NP_519342 |
Protein GI | 17545940 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00041238 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCATCCC ATCCCACCTC CAGCACGGAG CCGACGCGTG CCATCCTGGT CGCTGTCGAT TTCGGCAAAC ATGATTTCCA GGAAAGTCTG AGCGAACTGG CGCTGCTGGC CTCGACCGCG GGCTCCGAGC CGGTGCGCGC CGTGACGGGC CGTCGCTCCC GGCCCGACGC CGCGCTGTTC ATCGGCGCGG GCAAGGCCGA GGAAGTGAAG ATCGCGGCGG ACGAGGACGA CGCCGAGATC GTCATCTTCA ACCATGCGCT GAGTCCGGCG CAGCAGCGCA ACCTGGAGCG CTTCTTCGGC CGCCATGTGG TGGACCGGAC CGGCCTGATC CTCGACATCT TCAGTCAGCG CGCGCAGAGC CACGTCGGCA AGGTGCAGGT GGAGCTCGCG CGCGTGCGCT ACCAGGCTTC GCGCCTGGTG CGTGCGTGGA GCCACCTGGA GCGGCAGAAG GGCGGGATCG GCATGCGCGG CGGCCCGGGC GAGCGTCAGC TCGAACTGGA CCGCCGGATG CTGGATGAGC GCGCCAAGCG GCTGTCGGCC GAGCTCGACC GGCTGCAGCG CCAGCACGAT ACGCAACGGC GCGCGCGCAG CCGCAACGAT GCGTTTTCCG TGTCGCTGGT CGGCTATACC AACGCCGGCA AGTCGACGCT GTTCAATGCC CTGACCAAGG CGCGGGCCTA CGCCGCCAAC CAGCTGTTCG CCACGCTGGA TACGACCTCC CGCCGGCTCT ATCTGGAAGG GCTGGGCAAC GTGGTGCTGT CGGACACCGT CGGCTTTATC CGCGATCTGC CGACGCAACT GGTGGCGGCT TTCCGCGCCA CCCTGGAAGA GACCGTCCAC GCCGACGTGC TGCTGCACGT GGTGGATGCC GCGAGCGCGG TCAAGCACGA GCAGATGGAG CAGGTCGACC GCGTGCTGGC CGAGATCAAT GCCAGCGACA TCCCGCAGAT CCTGGTGATG AACAAGATCG ACGCGGCCGA GGAACTGCGC TCGCAGGGAC CGCGCATCGA GCGTGACGAG GCCGGTGCGG TGCGCCGCGT GTTTGTCTCG GCACTCGAAG GGGCTGGGCT GGAGCTGCTG CGCGAGGCCC TGGTCGAGAC GGCGATTCGC CTGCGCGAGC ACCCGTCGTC GCGCGATGGC GATTTCGATC CGCGTTTCGA TACCCGCCGG GAGACCTCGT CCGCGCAACG TGACGAACTG TCGCAGGTGC CGCCCGCAAG TGCGCTTCCC GCCGAGCGTG GCGGACGAGA CTGA
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Protein sequence | MPSHPTSSTE PTRAILVAVD FGKHDFQESL SELALLASTA GSEPVRAVTG RRSRPDAALF IGAGKAEEVK IAADEDDAEI VIFNHALSPA QQRNLERFFG RHVVDRTGLI LDIFSQRAQS HVGKVQVELA RVRYQASRLV RAWSHLERQK GGIGMRGGPG ERQLELDRRM LDERAKRLSA ELDRLQRQHD TQRRARSRND AFSVSLVGYT NAGKSTLFNA LTKARAYAAN QLFATLDTTS RRLYLEGLGN VVLSDTVGFI RDLPTQLVAA FRATLEETVH ADVLLHVVDA ASAVKHEQME QVDRVLAEIN ASDIPQILVM NKIDAAEELR SQGPRIERDE AGAVRRVFVS ALEGAGLELL REALVETAIR LREHPSSRDG DFDPRFDTRR ETSSAQRDEL SQVPPASALP AERGGRD
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