| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1218 |
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| Symbol | |
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| ID | 1220040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1287137 |
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| End bp | 1288303 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237594 |
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| Product | lipoprotein transmembrane |
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| Protein accession | NP_519339 |
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| Protein GI | 17545937 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.032892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCACG CACTTGAGCA GGGTGGCGTC GCGCGTGCGG CGCGGGTGAC GATGTTGGTG
CTGGCCGCGG CCGCCGTGCT GGGCGGCTGC TCGCTGTTCA GCAGCAAGAA CAAGCACGAG
CCCGCCAAGC TGCAGGCTGT CCAGCAGGTG CTGGCCGTGC GCCAGGCGTG GAGCGTGGGC
GTCGGCAAGA GCGGCCGCTA CGTGATGCAG CCGGCCGTGG CCGGCAGCAA CGTCTACGTC
TCGGCGGCCG GCGGCACGGT CACCGCGCTG GAAGGCGCGA CCGGCCGCAC CGTCTGGCAG
GGCAAGGCCG GTGTCGACCT GACTTCGGGC CCGGGCAGCG ATGGCACCCT GACGGCCGTG
GCCGGCGAGA AGGGCGCCGT CATTGCCTTC GATGACAAGG GGGCGCAGAA GTGGAAGGCC
TCGATCAACG GTGAAGTGCT GACCGCGCCG CTGGTCGGTC AGGGCCTGGT GGTGGTGCGC
ACCACTGATG GCCGCATCCT GGGGCTGGAT GGTGCCAGCG GCGACCGCAA GTGGATCTAC
CAGCGTTCGC CGTCCGCACT GAACCTGCGC AGCAGCCTGC CGATGGTCTT CGCCGGCGAC
AACGTCGTGC TGGGCTTTGC CGGCGGCAAG CTGGGCGCGG TTGCGCTCAA CAACGGCGCG
CTGCGGTGGG AGGCCACGGT GTCGTATCCC CGCGGCGTGT CGGAGATCGA ACGCCTGAAC
GACGTGACCG GCACCCCGTC GATCGACGGC CAGCAGGTGT GCGCCGTCAG CTTCCAGGGC
CGCGTGGCGT GCTTCGACGT CACGACCGGC GCTCCGCGCT GGGGCCGAGA TTTCTCGTCG
CCGACCGGCG TGACGCAGGA AGACGGCAAT CTGTTCGCGG CGGACGACAA GTCGATCGTC
TACGGCTTCA ACGCGCAGAA CGGCGCCGAC CTGTGGAAGA ACGAGGCGCT GCTGTGGCGC
GAGCTGGGTG CGCCGCTGGC GTTCGGCCGC GCCGTGATCG TCGGCGATTT CGAAGGCTGG
CTGCATTTCC TGTCGCGCGA TGACGGCAAG TTCGTCGCGC GCGTGAAGAC CGATGGCAGC
GCCATCAGCG CCGCGCCGGT CGTGGTGGGC CAGACGCTGG TCGTGCAGAC GCGTGGTGGC
GGCGTCTACG GCTACGTGCC GAAATAA
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| Protein sequence | MIHALEQGGV ARAARVTMLV LAAAAVLGGC SLFSSKNKHE PAKLQAVQQV LAVRQAWSVG
VGKSGRYVMQ PAVAGSNVYV SAAGGTVTAL EGATGRTVWQ GKAGVDLTSG PGSDGTLTAV
AGEKGAVIAF DDKGAQKWKA SINGEVLTAP LVGQGLVVVR TTDGRILGLD GASGDRKWIY
QRSPSALNLR SSLPMVFAGD NVVLGFAGGK LGAVALNNGA LRWEATVSYP RGVSEIERLN
DVTGTPSIDG QQVCAVSFQG RVACFDVTTG APRWGRDFSS PTGVTQEDGN LFAADDKSIV
YGFNAQNGAD LWKNEALLWR ELGAPLAFGR AVIVGDFEGW LHFLSRDDGK FVARVKTDGS
AISAAPVVVG QTLVVQTRGG GVYGYVPK
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