| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1215 |
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| Symbol | ispG |
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| ID | 1220037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1283734 |
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| End bp | 1285029 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237591 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | NP_519336 |
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| Protein GI | 17545934 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.629125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA CTACGCCCGT CGATTGCGCT CCCGCCTTGC CCGGCCCGCT TCCGCGCCGG
CACTCGCGTG CGGCCGAGAT CCGCTGGGGC GAGCGCCTGG TCCGCGTGGG CGGCGACGCG
CCGGTCTGCG TGCAGTCGAT GACCAACACC GACACGGCGG ATGCTATCGG CACCGCCATC
CAGGTGAAGG AACTCGCGCG CACCGGTTCC GAGCTGGTGC GCATCACCGT GAATACGCCG
GAAGCCGCCG CAGCCGTCCC AGCCATCCGC GAGCAGCTTG ACCGCATGGG CATCGATGTG
CCGCTGGTCG GCGATTTCCA CTACAACGGC CACAAGCTGC TGCAGGACCA TCCGGCGTGC
GCCGAGGCGC TGTCGAAGTA CCGCATCAAC CCGGGCAACG TGGGGCAGGG CGCCAAGCGC
GACACGCAGT TCGCCCAGAT GATCGAGACG GCCTGCCGCT ACGGCAAGCC GGTGCGCATC
GGCGTCAACT GGGGCAGCCT GGACCAGGAC CTGCTCGCGC GCATCATGGA CGAGAACGCG
CAGCGCGCCG CGCCGTGGGA CGCGCGTGCC GTGATGATCG AAGCGCTGAT CACGTCCGCC
ATCGAGTCGG CGCGCAAGGC CGAGGAGATC GGCCTGCCCG GCAGCCAGAT CATCCTGTCG
TGCAAGGTGT CGGCGGTGCA GGACCTGATC GCGGTCTACC GCGAGCTGGC GCGCCGCTGT
GACTACGCAT TGCACCTGGG CCTGACCGAG GCGGGCATGG GCAGCAAGGG GATCGTGGCC
TCGACGGCCG CGCTGTCGGT GCTGCTGCAG GAAGGCATCG GCGACACCAT CCGCATTTCG
CTGACGCCGG AGCCGGGCGC GCCGCGCGAG AAGGAAGTCA TCGTCGCGCA GGAGATCCTG
CAGACCATGG GGCTGCGCAA TTTCACGCCG ATGGTCATCG CGTGCCCTGG CTGCGGCCGC
ACCACCAGCA CGGTGTTCCA GGAGCTGGCG GCGCGCATCC AGTCGTATCT GCGCGAGCAG
ATGCCGGTGT GGAAGACGCA GTACCCCGGC GTCGAAGACA TGAACGTCGC GGTGATGGGC
TGCATCGTCA ATGGCCCGGG CGAGAGCAAG CATGCCAATA TCGGCATCTC GCTGCCGGGC
ACGGGCGAAT CGCCGGCGGC GCCGGTGTTC GTCGATGGCG TCAAGGTGAA GACGCTGCGC
GGCGAACGCA TCGCCGAAGA CTTCCAGGTC ATCGTCGACG AATACGTGCG CACGCACTAC
GGTGCGGCGC AGGCGAAAGC AACGGCGGCG GAATAA
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| Protein sequence | MQMTTPVDCA PALPGPLPRR HSRAAEIRWG ERLVRVGGDA PVCVQSMTNT DTADAIGTAI
QVKELARTGS ELVRITVNTP EAAAAVPAIR EQLDRMGIDV PLVGDFHYNG HKLLQDHPAC
AEALSKYRIN PGNVGQGAKR DTQFAQMIET ACRYGKPVRI GVNWGSLDQD LLARIMDENA
QRAAPWDARA VMIEALITSA IESARKAEEI GLPGSQIILS CKVSAVQDLI AVYRELARRC
DYALHLGLTE AGMGSKGIVA STAALSVLLQ EGIGDTIRIS LTPEPGAPRE KEVIVAQEIL
QTMGLRNFTP MVIACPGCGR TTSTVFQELA ARIQSYLREQ MPVWKTQYPG VEDMNVAVMG
CIVNGPGESK HANIGISLPG TGESPAAPVF VDGVKVKTLR GERIAEDFQV IVDEYVRTHY
GAAQAKATAA E
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