| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1214 |
|---|
| Symbol | |
|---|
| ID | 1220036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1282576 |
|---|
| End bp | 1283679 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637237590 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519335 |
|---|
| Protein GI | 17545933 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.567151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC GCGATGCGGC GAACACCGGC GATCTTGCGC CAGGGGGCTC GCCTGCCGAG
CCTTCCGCGG TGTCGCACGA CCGTGATGAT GCGTTGCGCC AGATCGCCGG GCGCCTGCGT
GCTGGCCGCG AAAGCCAGCG CCTGACGATC GAGGATCTTG CGACGCGCCT GAAAGTGGCG
CCGGCCAAGC TGCTGGCGGT GGAGTCCGGC GACGTCAGCG CGTTGCCGGA CATGACGTTT
GCCAAGGGCC TGATCCGCAC GTACGCACGC GTACTGCAGG TCGATGTCGA CGACCAGCTC
GCGCGCCTCA ACGTGCGCGT GCAGGTCGCC AACATCGGCT TGCGCCCGGA GGGCGGCCTT
GGGAAGACGT TTTCCGACAA GCCGAGCTTT GCCGCGCGCC GCACCGGCAG CCGCTGGCTG
ATCGGCTTGC TGGTGGCCGT GGTGGTGATC GGCGGGGCGC TGGCGGGTAT GGACCGGCTC
AAGCAATGGC TGGCTTCCCA CGCGCCGGAA ACCACGCAAG CACCTGCCGG GCCGGCCGCA
AAGGCACCCG CCGCGACCGA ACCGGCGCCC GCTGGCGCGG AAGCCTCGTC GGCACCTGCC
GCCACGTCGG GCCCGGCGGA AGCGCCTGCC GCGTCGATGC CGACGCCGCT GACGCCTGCC
ACGCCCACCG AGCCGGCTTC CGGCACCGTG ACAGCGCCGC TGGCGCCGCC GCCGACGTTG
CCGCGTTCCG ATGCGGGCGC CATGGCGGCA CCTGCCACCG CAGTGGATGC CACTAGGCCG
GCCGTCGTCA GCGTCGATGC GTCGTCGGTT CCTGCCGTGC CTGCCGCCGA GGTGGCCAGC
AAGCGAGCCG TCGGCAATGC CGCCGGCAGC GCGCTGTCGG TGCGCTTCTC GGGCGCTTCG
TGGTACGAGA TCAAGGATAA GTCGGGCAAG ACGCTGGTCA GCGGCCTGGC GAGGGACGGC
GATGCGCGGG ACGTGAACGG CACGCCGCCG TTCAAGGTCG TTTTCGGCAA TGCCGAAGCG
GTCGAGTCGC TGACCGTGTC CGGCGCACCG GTCGATATCC GGAAGTACGC CCGCAATCGC
GTGGCGCGCG CCACGCTGCC CTGA
|
|---|
| Protein sequence | MTDRDAANTG DLAPGGSPAE PSAVSHDRDD ALRQIAGRLR AGRESQRLTI EDLATRLKVA
PAKLLAVESG DVSALPDMTF AKGLIRTYAR VLQVDVDDQL ARLNVRVQVA NIGLRPEGGL
GKTFSDKPSF AARRTGSRWL IGLLVAVVVI GGALAGMDRL KQWLASHAPE TTQAPAGPAA
KAPAATEPAP AGAEASSAPA ATSGPAEAPA ASMPTPLTPA TPTEPASGTV TAPLAPPPTL
PRSDAGAMAA PATAVDATRP AVVSVDASSV PAVPAAEVAS KRAVGNAAGS ALSVRFSGAS
WYEIKDKSGK TLVSGLARDG DARDVNGTPP FKVVFGNAEA VESLTVSGAP VDIRKYARNR
VARATLP
|
|---|
| |