Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1212 |
Symbol | |
ID | 1220034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1280644 |
End bp | 1281795 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237588 |
Product | hypothetical protein |
Protein accession | NP_519333 |
Protein GI | 17545931 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATA TGGTGAATCT TCTTGATTTC GACGCACAGG GCCTGCTCGC ATATTGCGAG AGCCTGGGCG AGAAGTCGTT CCGCGCCAAG CAGCTGCAGC GCTGGATTCA CCAGTCGGGC GCCGCCGATT TTGGCGAGAT GACCGATCTC GCCAAGTCCC TGCGCGAGAA GCTTGCGACC CGCGCCACCA TCCAGGCGCC GGCGGTCATC TCCGACCACC TGTCGTCGGA CGGCACGCGC AAGTGGCTGG TCGACGTGGG TGCCGGCAAT GCCGTCGAGA CGGTGTACAT CCCCGAGGAG ACGCGCGGCA CGCTGTGCGT GTCTTCGCAG GCGGGGTGCG CCGTCAACTG CCGGTTCTGT TCGACCGGCA AGCAGGGGTT CTCGCGCAAC CTCAGCACAG GCGAGATCGT CGGCCAGCTG TGGATGGCCG AGTTCGCCAT GCGCAAGCAG CTCGGCCGCG GCCCCAAGGA TGACCGCGTC ATCACAAACG TCGTGATGAT GGGCATGGGC GAGCCGCTGC TCAACTATGA CGCCGTGGTG CCGGCCATGC GCCTGATGCT GGATGACAAT GCCTATGGCC TGTCGCGCCG GCGCGTGACG CTGTCCACTT CCGGCGTGGT GCCGATGATG GACCGGCTGT CGCAAGATTT GCCGGTGGCG CTGGCGGTTT CGCTGCATGC CTCCAACGAT GCGCTGCGCG ATGTGCTGGT GCCACTCAAC AAGAAGTATC CGCTGGCCGA ACTGATGGCG GCCTGCCGCC GCTATCTCGA ATTCGCGCCG CGGGACTTCA TCACCTTCGA ATACTGCATG CTGGACGGCG TCAATGATTC CGTCGAGCAT GCGCGCGAAC TGCTGCGCGT CGTTGCCGAC GTGCCGTGCA AGTTCAACCT GATCCCGTTC AACCCGTTCC CCGAATCGGG CCTGAAGCGC TCGAACAACG AGCAGATTCG CCGGTTCTCG CAGGTGCTGC TGGACGCGGG CATCGTCACC ACGATCCGCA AGACGCGCGG TGACGATATC GACGCGGCCT GCGGCCAGTT GGCCGGCGAG GTCAAGGATC GTACGCGCCT GGCCGAGCGC GGTAAATTCG GCAAGACTGT TCCGATCCAG GTGATCGGGG CCGATTCCAC TCACCGCATG GGTTCCGCAT GA
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Protein sequence | MNDMVNLLDF DAQGLLAYCE SLGEKSFRAK QLQRWIHQSG AADFGEMTDL AKSLREKLAT RATIQAPAVI SDHLSSDGTR KWLVDVGAGN AVETVYIPEE TRGTLCVSSQ AGCAVNCRFC STGKQGFSRN LSTGEIVGQL WMAEFAMRKQ LGRGPKDDRV ITNVVMMGMG EPLLNYDAVV PAMRLMLDDN AYGLSRRRVT LSTSGVVPMM DRLSQDLPVA LAVSLHASND ALRDVLVPLN KKYPLAELMA ACRRYLEFAP RDFITFEYCM LDGVNDSVEH ARELLRVVAD VPCKFNLIPF NPFPESGLKR SNNEQIRRFS QVLLDAGIVT TIRKTRGDDI DAACGQLAGE VKDRTRLAER GKFGKTVPIQ VIGADSTHRM GSA
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