Gene RSc1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1212 
Symbol 
ID1220034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1280644 
End bp1281795 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content64% 
IMG OID637237588 
Producthypothetical protein 
Protein accessionNP_519333 
Protein GI17545931 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA TGGTGAATCT TCTTGATTTC GACGCACAGG GCCTGCTCGC ATATTGCGAG 
AGCCTGGGCG AGAAGTCGTT CCGCGCCAAG CAGCTGCAGC GCTGGATTCA CCAGTCGGGC
GCCGCCGATT TTGGCGAGAT GACCGATCTC GCCAAGTCCC TGCGCGAGAA GCTTGCGACC
CGCGCCACCA TCCAGGCGCC GGCGGTCATC TCCGACCACC TGTCGTCGGA CGGCACGCGC
AAGTGGCTGG TCGACGTGGG TGCCGGCAAT GCCGTCGAGA CGGTGTACAT CCCCGAGGAG
ACGCGCGGCA CGCTGTGCGT GTCTTCGCAG GCGGGGTGCG CCGTCAACTG CCGGTTCTGT
TCGACCGGCA AGCAGGGGTT CTCGCGCAAC CTCAGCACAG GCGAGATCGT CGGCCAGCTG
TGGATGGCCG AGTTCGCCAT GCGCAAGCAG CTCGGCCGCG GCCCCAAGGA TGACCGCGTC
ATCACAAACG TCGTGATGAT GGGCATGGGC GAGCCGCTGC TCAACTATGA CGCCGTGGTG
CCGGCCATGC GCCTGATGCT GGATGACAAT GCCTATGGCC TGTCGCGCCG GCGCGTGACG
CTGTCCACTT CCGGCGTGGT GCCGATGATG GACCGGCTGT CGCAAGATTT GCCGGTGGCG
CTGGCGGTTT CGCTGCATGC CTCCAACGAT GCGCTGCGCG ATGTGCTGGT GCCACTCAAC
AAGAAGTATC CGCTGGCCGA ACTGATGGCG GCCTGCCGCC GCTATCTCGA ATTCGCGCCG
CGGGACTTCA TCACCTTCGA ATACTGCATG CTGGACGGCG TCAATGATTC CGTCGAGCAT
GCGCGCGAAC TGCTGCGCGT CGTTGCCGAC GTGCCGTGCA AGTTCAACCT GATCCCGTTC
AACCCGTTCC CCGAATCGGG CCTGAAGCGC TCGAACAACG AGCAGATTCG CCGGTTCTCG
CAGGTGCTGC TGGACGCGGG CATCGTCACC ACGATCCGCA AGACGCGCGG TGACGATATC
GACGCGGCCT GCGGCCAGTT GGCCGGCGAG GTCAAGGATC GTACGCGCCT GGCCGAGCGC
GGTAAATTCG GCAAGACTGT TCCGATCCAG GTGATCGGGG CCGATTCCAC TCACCGCATG
GGTTCCGCAT GA
 
Protein sequence
MNDMVNLLDF DAQGLLAYCE SLGEKSFRAK QLQRWIHQSG AADFGEMTDL AKSLREKLAT 
RATIQAPAVI SDHLSSDGTR KWLVDVGAGN AVETVYIPEE TRGTLCVSSQ AGCAVNCRFC
STGKQGFSRN LSTGEIVGQL WMAEFAMRKQ LGRGPKDDRV ITNVVMMGMG EPLLNYDAVV
PAMRLMLDDN AYGLSRRRVT LSTSGVVPMM DRLSQDLPVA LAVSLHASND ALRDVLVPLN
KKYPLAELMA ACRRYLEFAP RDFITFEYCM LDGVNDSVEH ARELLRVVAD VPCKFNLIPF
NPFPESGLKR SNNEQIRRFS QVLLDAGIVT TIRKTRGDDI DAACGQLAGE VKDRTRLAER
GKFGKTVPIQ VIGADSTHRM GSA