| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1211 |
|---|
| Symbol | ndk |
|---|
| ID | 1220033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1280175 |
|---|
| End bp | 1280600 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637237587 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | NP_519332 |
|---|
| Protein GI | 17545930 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCG AACGCACTCT GTCGATTATC AAACCGGATG CCGTGGCCAA GAATGTCATC
GGCCAGATCT ATGCGCGCTT CGAAGGCGCC GGCCTGAAGG TCGTGGCAGC CAAGATGATC
CACCTGTCGC GCGCTGAAGC CGAGCAGTTC TACGCCGTCC ACAAGGAGCG CCCGTTCTTC
AAGGACCTGG TCGACTTCAT GATCTCCGGC CCCGTGATGG TGCAGGCACT GGAAGGCGAA
AGCGCCATCG TCAAGAACCG TGACCTGATG GGTGCAACCG ATCCGAAGAA GGCAGAGAAG
GGCACGATCC GCGCCGATTT CGCCGACAGC ATCGATGCCA ACGCCGTGCA CGGTTCGGAC
GCAGCCGAAA CGGCTGCCGT GGAAGTCGCT TTCTTCTTCC CCGGCCTGAA CATTTACAGC
CGCTAA
|
|---|
| Protein sequence | MAIERTLSII KPDAVAKNVI GQIYARFEGA GLKVVAAKMI HLSRAEAEQF YAVHKERPFF
KDLVDFMISG PVMVQALEGE SAIVKNRDLM GATDPKKAEK GTIRADFADS IDANAVHGSD
AAETAAVEVA FFFPGLNIYS R
|
|---|
| |