Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1210 |
Symbol | |
ID | 1220032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1279105 |
End bp | 1279806 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637237586 |
Product | hypothetical protein |
Protein accession | NP_519331 |
Protein GI | 17545929 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACC AACTCAACAC GTACGGTTTT GGCGCTTCCG GCACCGCCGG CGCGTTGGCC GTCCGCAACC GCGTGCTGCG CAATACCTAT TGGCTGCTCG CACTTTCGAT GATCCCCACC ATCCTGGGTG CATGGATCGG TGTCGCCACG GGCTTCAACC TGATGGCCGG CCGGCCGCTG ATGGGCTTCC TGATCTTCAT GGGGGTGGCC TTCGGCTTCT TCTACGCCAT CGAACGCTTC AAGAACAGCG GCATGGGCGT TGCCTTGCTG CTCGGCTTCA CGTTCTTCAT GGGGCTCATG CTGTCGCGGC TGATCGGCAT GATCCTCGGC TTCTCGAACG GCGCAGCACT GATCATGACG GCGTTCGGCG GCACGGCAAC CATCTTTGCT GTGATGGCCA CCGTGGCCAC CGTCAGCAAG CGCGATTTCT CCGGCCTGGG CAAGTGGCTG TTCATGGGCG TGCTGGTGCT GATCGTCGGC TCCGTGGCCA ACATCTGGCT GCAGCTGCCG TCGATGATGC TGACGATCTC GGTACTGGCC ATCGCCATCT TCTCGGCCTA CATCCTGTAC GACGTGCAGC GCATCGTGAA CGGCGGCGAG ACCAACTACG TGACGGCCAC GCTGGCGATC TACCTGGACG TCTACAACGT CTTCACGAAT CTGCTGGCGA TCCTGGGCAT CTTTGGCGGC AACCGCAACT GA
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Protein sequence | MDNQLNTYGF GASGTAGALA VRNRVLRNTY WLLALSMIPT ILGAWIGVAT GFNLMAGRPL MGFLIFMGVA FGFFYAIERF KNSGMGVALL LGFTFFMGLM LSRLIGMILG FSNGAALIMT AFGGTATIFA VMATVATVSK RDFSGLGKWL FMGVLVLIVG SVANIWLQLP SMMLTISVLA IAIFSAYILY DVQRIVNGGE TNYVTATLAI YLDVYNVFTN LLAILGIFGG NRN
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