Gene RSc1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1210 
Symbol 
ID1220032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1279105 
End bp1279806 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID637237586 
Producthypothetical protein 
Protein accessionNP_519331 
Protein GI17545929 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACC AACTCAACAC GTACGGTTTT GGCGCTTCCG GCACCGCCGG CGCGTTGGCC 
GTCCGCAACC GCGTGCTGCG CAATACCTAT TGGCTGCTCG CACTTTCGAT GATCCCCACC
ATCCTGGGTG CATGGATCGG TGTCGCCACG GGCTTCAACC TGATGGCCGG CCGGCCGCTG
ATGGGCTTCC TGATCTTCAT GGGGGTGGCC TTCGGCTTCT TCTACGCCAT CGAACGCTTC
AAGAACAGCG GCATGGGCGT TGCCTTGCTG CTCGGCTTCA CGTTCTTCAT GGGGCTCATG
CTGTCGCGGC TGATCGGCAT GATCCTCGGC TTCTCGAACG GCGCAGCACT GATCATGACG
GCGTTCGGCG GCACGGCAAC CATCTTTGCT GTGATGGCCA CCGTGGCCAC CGTCAGCAAG
CGCGATTTCT CCGGCCTGGG CAAGTGGCTG TTCATGGGCG TGCTGGTGCT GATCGTCGGC
TCCGTGGCCA ACATCTGGCT GCAGCTGCCG TCGATGATGC TGACGATCTC GGTACTGGCC
ATCGCCATCT TCTCGGCCTA CATCCTGTAC GACGTGCAGC GCATCGTGAA CGGCGGCGAG
ACCAACTACG TGACGGCCAC GCTGGCGATC TACCTGGACG TCTACAACGT CTTCACGAAT
CTGCTGGCGA TCCTGGGCAT CTTTGGCGGC AACCGCAACT GA
 
Protein sequence
MDNQLNTYGF GASGTAGALA VRNRVLRNTY WLLALSMIPT ILGAWIGVAT GFNLMAGRPL 
MGFLIFMGVA FGFFYAIERF KNSGMGVALL LGFTFFMGLM LSRLIGMILG FSNGAALIMT
AFGGTATIFA VMATVATVSK RDFSGLGKWL FMGVLVLIVG SVANIWLQLP SMMLTISVLA
IAIFSAYILY DVQRIVNGGE TNYVTATLAI YLDVYNVFTN LLAILGIFGG NRN