Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1208 |
Symbol | |
ID | 1220030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1276644 |
End bp | 1277513 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237584 |
Product | hypothetical protein |
Protein accession | NP_519329 |
Protein GI | 17545927 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACCA TCATCCTGAC ATGGAACATC CAGTGGGGCC GCGGTGCGGA TGGCCGGGTC GACCTGTCGC GCATGCTGGC CGAAGCGCGC GCCATGGGGT CGTTCGACGT GCTGTGCCTG CAGGAGGTCA CGTCGGGCTT CGGCCATCTG CCCGGCCAAC CGGGCGAGGA CCAGTGGCAG GAACTGGCCG GAGCGCTCGG ACAGGCATTC ACCCTGATCG ACGGCATCGC ACTGGAGCGC CACGAGGGCG CACAGATCCG GCGCTTCGGC AATGCCATCG CCACGCGGCT GCCGGTGCTG CACGTCGCGC GGCATGCCCT GCCCTGTCCG GCCGATGCCG GCCCGACCAT GCCGCGCATG GCCATCGAGG CGATTGTGCA GGCGCCATTC GGGCCGCTGC GCGTGGTCAG CACGCACCTG GAGTATTACT CGGAAACGCA GCGCATCGCG CAAATTGACG CCCTGCGCGC GCTTCATGTG GAGGGCTGCA TGCGCGCGGC CCATCCACCC ACGCTGGGGC CGGAACCCAC CGATGGCCCG TTTCGTCCGC TCGCGCAGAC ACGCGCCACC GTCATCTGCG GCGATTTCAA CTGCAAGCCG GATTCCAAGC CCAAGCGGCT CGCCACCGTA CCGTTCTCAC ATGAGGCAGC AGCCCTGTAC GACGCCTGGG AAACCGCACA CGGCCCCACG CCGCAACCGC CGACATTCGG CGTGCATGAC CGGACCGGGT GGACGGAGCC GGCCTACGCC TGCGATTTCA TGCTGGTCAG CGAACCGCTG AAGACGCGCG TGACCCGCGT GGAAGTCAAC AGCACGACGC AGGCATCCGA CCACCAGCCA ACGCTGCTGG AGCTGCGCGA CGCGGAATAG
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Protein sequence | MGTIILTWNI QWGRGADGRV DLSRMLAEAR AMGSFDVLCL QEVTSGFGHL PGQPGEDQWQ ELAGALGQAF TLIDGIALER HEGAQIRRFG NAIATRLPVL HVARHALPCP ADAGPTMPRM AIEAIVQAPF GPLRVVSTHL EYYSETQRIA QIDALRALHV EGCMRAAHPP TLGPEPTDGP FRPLAQTRAT VICGDFNCKP DSKPKRLATV PFSHEAAALY DAWETAHGPT PQPPTFGVHD RTGWTEPAYA CDFMLVSEPL KTRVTRVEVN STTQASDHQP TLLELRDAE
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