Gene RSc1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1208 
Symbol 
ID1220030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1276644 
End bp1277513 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID637237584 
Producthypothetical protein 
Protein accessionNP_519329 
Protein GI17545927 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACCA TCATCCTGAC ATGGAACATC CAGTGGGGCC GCGGTGCGGA TGGCCGGGTC 
GACCTGTCGC GCATGCTGGC CGAAGCGCGC GCCATGGGGT CGTTCGACGT GCTGTGCCTG
CAGGAGGTCA CGTCGGGCTT CGGCCATCTG CCCGGCCAAC CGGGCGAGGA CCAGTGGCAG
GAACTGGCCG GAGCGCTCGG ACAGGCATTC ACCCTGATCG ACGGCATCGC ACTGGAGCGC
CACGAGGGCG CACAGATCCG GCGCTTCGGC AATGCCATCG CCACGCGGCT GCCGGTGCTG
CACGTCGCGC GGCATGCCCT GCCCTGTCCG GCCGATGCCG GCCCGACCAT GCCGCGCATG
GCCATCGAGG CGATTGTGCA GGCGCCATTC GGGCCGCTGC GCGTGGTCAG CACGCACCTG
GAGTATTACT CGGAAACGCA GCGCATCGCG CAAATTGACG CCCTGCGCGC GCTTCATGTG
GAGGGCTGCA TGCGCGCGGC CCATCCACCC ACGCTGGGGC CGGAACCCAC CGATGGCCCG
TTTCGTCCGC TCGCGCAGAC ACGCGCCACC GTCATCTGCG GCGATTTCAA CTGCAAGCCG
GATTCCAAGC CCAAGCGGCT CGCCACCGTA CCGTTCTCAC ATGAGGCAGC AGCCCTGTAC
GACGCCTGGG AAACCGCACA CGGCCCCACG CCGCAACCGC CGACATTCGG CGTGCATGAC
CGGACCGGGT GGACGGAGCC GGCCTACGCC TGCGATTTCA TGCTGGTCAG CGAACCGCTG
AAGACGCGCG TGACCCGCGT GGAAGTCAAC AGCACGACGC AGGCATCCGA CCACCAGCCA
ACGCTGCTGG AGCTGCGCGA CGCGGAATAG
 
Protein sequence
MGTIILTWNI QWGRGADGRV DLSRMLAEAR AMGSFDVLCL QEVTSGFGHL PGQPGEDQWQ 
ELAGALGQAF TLIDGIALER HEGAQIRRFG NAIATRLPVL HVARHALPCP ADAGPTMPRM
AIEAIVQAPF GPLRVVSTHL EYYSETQRIA QIDALRALHV EGCMRAAHPP TLGPEPTDGP
FRPLAQTRAT VICGDFNCKP DSKPKRLATV PFSHEAAALY DAWETAHGPT PQPPTFGVHD
RTGWTEPAYA CDFMLVSEPL KTRVTRVEVN STTQASDHQP TLLELRDAE