| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1207 |
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| Symbol | rpoS |
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| ID | 1220029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1275477 |
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| End bp | 1276610 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237583 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | NP_519328 |
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| Protein GI | 17545926 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC AGAAAGCCGC CACGTCCGCC AACCCCGCCG ATGAGACCAT CGGCGCCGTC
GATGGCCCGA ACGCCCCGAA CGGGCGTAGC GGGCGGCGTG CGCGCGGCGC AGCGCCGGCA
GCCTCCGATG ACGTCGAAGT CGTCGATCCC CTGATCGATG AGGCGCCTGC CGCCGAGCCC
GCCGACATCG CCGATACCTC GGACGCCAAC GACAGCGCCG ACGAATCCGA CGAAGAGGAC
GAGGACGGCG AGGAGGCTGC GCCTGAGGAA GACTTCCGCA CGGTGTTGCA GGCCGAGCTG
GCCGCTGACA CCGTCCAGCA TTACCTGAAC CGCATCAGCA TCAAGCCGCT GCTGACGCCG
GCGGAGGAAC TGCACTTCTC CACGCTGGCC AAGGCAGGCG AGTTCGCCGC GCGGCAGGTG
ATGATCGAGC GCAATCTGCG CCTGGTGGTC AGTATCGCCA AGGGCTATCT GAACCGCGGC
GTGCCGCTGC TGGACCTGAT CGAAGAGGGC AACCTGGGGC TGATGCACGC GATCGAGAAA
TTCGATCCGG AGCGCGGCTT CCGTTTCTCC ACGTATGCCA CGTGGTGGAT CCGCCAGAGC
ATCGAGCGGG CCATCATGAA CCAGGCACGC ACCGTCCGCC TGCCGGTGCA CGTGATCCGC
GAGCTCAACC AGGTGCTGCG CGCCAAGCGC CATCTGGAAA AGAGCGGAAT CGATGGCCGC
GACGCCAGCA TCGAAGACAT TGCGCACCTG CTCGGCAAGA CCACCGAGGA GGTGCAGGAC
GTGCTTTCGC TCAACGAGCA CACGACCTCG CTCGATACGC CGTTCGATCT GGATCCGGGC
ACTAGCCTGC TCGATTTCCT GTCGGACGAG CATGGCGCCT CGCCAGACCA GGAAGTCGCG
CACCGCGAGT TGTCGCAGCT GATGAAATCC TGGCTGGCAC GGCTATCCGA CAAGCACCGC
TACGTGGTGG AACGCCGGTT CGGCCTTAAC CACATCGAGC CGGCCACCCT CGAAGAGCTG
GCCGCCGAGA TGGGCCTGAC GCGCGAGCGT GTGCGTCAGA TCCAGCAGGA AGCGCTGGTC
AAGCTCAAGC GGCACTTCGC CTCGCAAGGC GTGCGCAAGG ATGCGGTGCT GTAA
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| Protein sequence | MPRQKAATSA NPADETIGAV DGPNAPNGRS GRRARGAAPA ASDDVEVVDP LIDEAPAAEP
ADIADTSDAN DSADESDEED EDGEEAAPEE DFRTVLQAEL AADTVQHYLN RISIKPLLTP
AEELHFSTLA KAGEFAARQV MIERNLRLVV SIAKGYLNRG VPLLDLIEEG NLGLMHAIEK
FDPERGFRFS TYATWWIRQS IERAIMNQAR TVRLPVHVIR ELNQVLRAKR HLEKSGIDGR
DASIEDIAHL LGKTTEEVQD VLSLNEHTTS LDTPFDLDPG TSLLDFLSDE HGASPDQEVA
HRELSQLMKS WLARLSDKHR YVVERRFGLN HIEPATLEEL AAEMGLTRER VRQIQQEALV
KLKRHFASQG VRKDAVL
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