Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1202 |
Symbol | |
ID | 1220024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1270523 |
End bp | 1271659 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237578 |
Product | flavoprotein NADH-dependent oxidoreductase |
Protein accession | NP_519323 |
Protein GI | 17545921 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.655444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCAGT CTCTCTTTCC AGGAGCCGAG ATGACACAAC AACTGCTTTC TCCGATCCAA GTCGGCCAGA CGGCCCTCGC CAACCGCGTC GTGATGGCGC CGCTCACGCG CTCGCGCGCA GCCCAGCCCG GCGACGTGCC CACCGAGCTC AACGGGACGT ACTACGCGCA GCGCGCCACC GCGGGCCTGA TCGTCACCGA GGCCACGCAG GTCTCCCGGC AGGGCCAGGG CTATGCCTGG ACGCCGGGCA TGTATACCGA TGCGCAGGAA GCCGGCTGGA AGGCCGTGGT CGATGCCGTG CATGCCAAGG GCGGCCGTAT TTCGCAACAG TTGTGGCATG TGGGCCGCAT CTCGCACACG CTGCTGCAGG AGGGCGGCCA GGCGCCGGTC GCACCGTCGG CGATTGTCGC CCAGGGCGCG CAGAGCTTCG TCGTGCAGCC GGACGGCACG CCCGCCAACG TGCCGACCAG CGAGCCGCGC GCGCTGGCCA CGGAGGAGAT CCCCGGCATC ATCGCGCAGT ACCGCCAGGC CGTGCAGCGC GCCCGCCGCG CCGGTTTCGA CTTCGTCGAA ATCCATGCCG CCAACGGCTA CCTGCTGCAT CAGTTCCTGT CGACCAACAG CAACCAGCGC GCCGACCAGT ACGGCGGCTC GCTGGAGAAC CGGGCGCGGC TGATCCTGGA GGTGGTCGAC GCGGCCATCG CCGAGATCGG CGCCGAGCGC GTGGGCATCC GCCTGTCGCC GCACTTCGTC GCGCACGACA TCGCCGATGC CGAGGCCGAG ACCAGCGCGC TGTACCTCGC GCGTGAACTG ACCCGGCGCG GCGTCGCCTA CCTGCATATC GCCGAGCCGG ACTGGGCGGG CGGCCCGGAG CTGTCGGACG CGTTCCGCCG GCAACTGCGC GATGCGTTCA AGGGTGCACT GATCGTCTGC GGCCAGTACA CCGCGGAAGA GGGCGAGCAG ATGATCGCCT CGGGCCTGGC CGATGCCGTC GCCTTTGGCC GCCCCTTCAT CGCCAATCCG GACCTGGTGG CGCGCTTCCG TGCCGGCGCC GGCCTGAACA CGCCGGACCG CTCGACCTTC TACGGCGGTC AGGAGAAGGG CTACACCGAC TACCCGACAC TGGAAGAAGC CGCCTGA
|
Protein sequence | MFQSLFPGAE MTQQLLSPIQ VGQTALANRV VMAPLTRSRA AQPGDVPTEL NGTYYAQRAT AGLIVTEATQ VSRQGQGYAW TPGMYTDAQE AGWKAVVDAV HAKGGRISQQ LWHVGRISHT LLQEGGQAPV APSAIVAQGA QSFVVQPDGT PANVPTSEPR ALATEEIPGI IAQYRQAVQR ARRAGFDFVE IHAANGYLLH QFLSTNSNQR ADQYGGSLEN RARLILEVVD AAIAEIGAER VGIRLSPHFV AHDIADAEAE TSALYLAREL TRRGVAYLHI AEPDWAGGPE LSDAFRRQLR DAFKGALIVC GQYTAEEGEQ MIASGLADAV AFGRPFIANP DLVARFRAGA GLNTPDRSTF YGGQEKGYTD YPTLEEAA
|
| |