Gene RSc1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1202 
Symbol 
ID1220024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1270523 
End bp1271659 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content70% 
IMG OID637237578 
Productflavoprotein NADH-dependent oxidoreductase 
Protein accessionNP_519323 
Protein GI17545921 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.655444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGT CTCTCTTTCC AGGAGCCGAG ATGACACAAC AACTGCTTTC TCCGATCCAA 
GTCGGCCAGA CGGCCCTCGC CAACCGCGTC GTGATGGCGC CGCTCACGCG CTCGCGCGCA
GCCCAGCCCG GCGACGTGCC CACCGAGCTC AACGGGACGT ACTACGCGCA GCGCGCCACC
GCGGGCCTGA TCGTCACCGA GGCCACGCAG GTCTCCCGGC AGGGCCAGGG CTATGCCTGG
ACGCCGGGCA TGTATACCGA TGCGCAGGAA GCCGGCTGGA AGGCCGTGGT CGATGCCGTG
CATGCCAAGG GCGGCCGTAT TTCGCAACAG TTGTGGCATG TGGGCCGCAT CTCGCACACG
CTGCTGCAGG AGGGCGGCCA GGCGCCGGTC GCACCGTCGG CGATTGTCGC CCAGGGCGCG
CAGAGCTTCG TCGTGCAGCC GGACGGCACG CCCGCCAACG TGCCGACCAG CGAGCCGCGC
GCGCTGGCCA CGGAGGAGAT CCCCGGCATC ATCGCGCAGT ACCGCCAGGC CGTGCAGCGC
GCCCGCCGCG CCGGTTTCGA CTTCGTCGAA ATCCATGCCG CCAACGGCTA CCTGCTGCAT
CAGTTCCTGT CGACCAACAG CAACCAGCGC GCCGACCAGT ACGGCGGCTC GCTGGAGAAC
CGGGCGCGGC TGATCCTGGA GGTGGTCGAC GCGGCCATCG CCGAGATCGG CGCCGAGCGC
GTGGGCATCC GCCTGTCGCC GCACTTCGTC GCGCACGACA TCGCCGATGC CGAGGCCGAG
ACCAGCGCGC TGTACCTCGC GCGTGAACTG ACCCGGCGCG GCGTCGCCTA CCTGCATATC
GCCGAGCCGG ACTGGGCGGG CGGCCCGGAG CTGTCGGACG CGTTCCGCCG GCAACTGCGC
GATGCGTTCA AGGGTGCACT GATCGTCTGC GGCCAGTACA CCGCGGAAGA GGGCGAGCAG
ATGATCGCCT CGGGCCTGGC CGATGCCGTC GCCTTTGGCC GCCCCTTCAT CGCCAATCCG
GACCTGGTGG CGCGCTTCCG TGCCGGCGCC GGCCTGAACA CGCCGGACCG CTCGACCTTC
TACGGCGGTC AGGAGAAGGG CTACACCGAC TACCCGACAC TGGAAGAAGC CGCCTGA
 
Protein sequence
MFQSLFPGAE MTQQLLSPIQ VGQTALANRV VMAPLTRSRA AQPGDVPTEL NGTYYAQRAT 
AGLIVTEATQ VSRQGQGYAW TPGMYTDAQE AGWKAVVDAV HAKGGRISQQ LWHVGRISHT
LLQEGGQAPV APSAIVAQGA QSFVVQPDGT PANVPTSEPR ALATEEIPGI IAQYRQAVQR
ARRAGFDFVE IHAANGYLLH QFLSTNSNQR ADQYGGSLEN RARLILEVVD AAIAEIGAER
VGIRLSPHFV AHDIADAEAE TSALYLAREL TRRGVAYLHI AEPDWAGGPE LSDAFRRQLR
DAFKGALIVC GQYTAEEGEQ MIASGLADAV AFGRPFIANP DLVARFRAGA GLNTPDRSTF
YGGQEKGYTD YPTLEEAA