Gene RSc1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1194 
SymbolrecR 
ID1220016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1262514 
End bp1263137 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID637237570 
Productrecombination protein RecR 
Protein accessionNP_519315 
Protein GI17545913 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.381578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.476781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG GCGGTCCGGG CACGCCATCG GCGCTGCAGA TGCTGATCGA GGCCTTGCGC 
GTGCTGCCGG GCGTGGGGCC GAAGTCTGCG CAGCGCATGG CCTATCACCT GCTGCAGCAT
GACCGCGAAG GCGCGTCGCG GCTGGCCGAA GCGCTGGCCG AAGCGGCCGA GTCGATCCAC
CATTGCAGCC GCTGCAACAC CTTCACCGAG CAGGATGTCT GCGAGACCTG CCTGGACCCG
CGCCGCGACG CCTCGGTGCT GTGCGTGGTG GAAACGCCCG CCGACCAGAT GATGATCGAG
CAGACGCTGA CCTACCGCGG CCAGTATTTC GTGCTGATGG GGCGGCTCTC GCCGCTGGAC
AACATCGGCC CCAAGGAAAT CCACCTCGAG CGCCTGCTGG CCCGGGCGAC CGATCCGGCG
CTGGGCGGGC CGTGCGCCGA AGTCATTCTC GCCACCAACT TCACCAGCGA GGGCGAGGCC
ACCGCGCACT ACATCGGCGA GATGCTCAAG GCGCGCGGCA TCAAGGTGTC GCGGCTGGCG
CGCGGTGTGC CGGTGGGCGG CGAGCTGGAA TACGTGGACG CGGGCACCAT CGCCCGCGCG
GTGCTGGACC GGCGCCAGCT CTGA
 
Protein sequence
MMRGGPGTPS ALQMLIEALR VLPGVGPKSA QRMAYHLLQH DREGASRLAE ALAEAAESIH 
HCSRCNTFTE QDVCETCLDP RRDASVLCVV ETPADQMMIE QTLTYRGQYF VLMGRLSPLD
NIGPKEIHLE RLLARATDPA LGGPCAEVIL ATNFTSEGEA TAHYIGEMLK ARGIKVSRLA
RGVPVGGELE YVDAGTIARA VLDRRQL