Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1192 |
Symbol | |
ID | 1220014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1262060 |
End bp | 1262407 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637237568 |
Product | hypothetical protein |
Protein accession | NP_519313 |
Protein GI | 17545911 |
COG category | [S] Function unknown |
COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.237084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.460114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAG GCCAGATCGC CGGGCTGATG AAGCAAGCCC AGCAGATGCA GGAAAACATG AAGAAGATGC AGGAGCAGCT CAGCCAGATC GAGGTGGAGG GCGTGTCCGG CGCCGGCCTC GTGAAGGTGG TGATGACCTG CAAGAACGAT GTGAAGCGCG TGTCGATCGA CCCGAGCCTG CTGGCCGAAG GCGAAGACAA GGAGCTGCTG GAAGACCTCG TCGCCGCGGC CTTCAACGAT GCGGTGCGCA AGGCCGAAGC CACCACGCAG GAGAAGATGG GCACGGTCAC CTCCGGCCTG GGCGGCATGG CCAGCATGCT GCCGCCGGGC TTCAAGCTGC CGTTCTGA
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Protein sequence | MMKGQIAGLM KQAQQMQENM KKMQEQLSQI EVEGVSGAGL VKVVMTCKND VKRVSIDPSL LAEGEDKELL EDLVAAAFND AVRKAEATTQ EKMGTVTSGL GGMASMLPPG FKLPF
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