Gene RSc1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1191 
SymboldnaX 
ID1220013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1259777 
End bp1261963 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content73% 
IMG OID637237567 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionNP_519312 
Protein GI17545910 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.775033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.972053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AAGTGCTCGC CCGCAAGTGG CGCCCCCGCG ATTTCACCAC GCTGGTCGGT 
CAGGAACACG TGGTGAAGGC GCTCACGCAT GCGCTCGAAC AGCAGCGCCT GCACCACGCA
TACCTGTTCA CGGGCACGCG TGGTGTCGGC AAGACGACGC TGTCGCGCAT TCTCGCCAAA
TCGCTCAATT GCATCGGCAC GGACGGGCAG GGCGGCATCA CCGCGCAGCC GTGCGGCGTG
TGCCGCGCCT GCACCGAGAT CGATGCCGGG CGCTTCGTCG ATTACATCGA GATGGACGCC
GCCTCCAACC GCGGCGTCGA CGAGATGGCG CAGCTGCTCG ATCGCGCGGT CTACGCACCC
ACGGCCGGCC GCTTCAAGGT CTACATGATC GACGAAGTGC ACATGCTGAC CAACCACGCC
TTCAACGCGA TGCTGAAGAC GCTGGAGGAG CCGCCCGAGC ACGTCAAGTT CATCCTCGCG
ACCACCGACC CGCAGAAGAT TCCCGTCACG GTGCTGTCGC GCTGCCTGCA GTTCAACCTG
AAGCAGATGC CGCCGGGACA CATCGTGTCC CACCTGGACC GCATCCTCGG CGAGGAGGGC
ATCGCGCACG AGCCCAATGC GCTGCGCCTG CTGGCCTCGG CCGCACAGGG GTCGATGCGC
GATGCGCTGT CGCTGACCGA TCAGGCCATC GCGTACAGCG CCGGCGAAGT CACCGAGGCG
GCCGTGCGCG GCATGCTGGG CGCGATCGAC CAGAGCTACC TGGTGCGCCT GCTCGATGCG
CTCGCCGACG AGAACGGCGC GACACTGATC GGGATCGCCG ACGAGATGGC CGGGCGCAGC
CTGAGCTTCT CGGGGGCGCT GCAGGATCTG GCTTCGTTGC TGCAGAAGAT CGCGCTGGCA
CAGGTCGTGC CCGCCGCCGT GCAGGACGAC TGGCCCGAGG CCGACGACAT CCGCCGCCTG
GCCGAGCGCT TCGATGCGCA GTCGGTGCAA CTGTTCTACC AGTTCGCCAA CCTCGGTCGC
AACGAACTGG CGCTGGCGCC CGACGAATAC GCCGGCTTCA CGATGACGCT GCTGCGCATG
CTGGCGTTCC AGCCCGGCCA GTCGGGCGGC GATGCGCCGC CGCCGTCGGG TAGCGGCAAG
CGTGCCGTGC CGTCGGCCGG CGTGCAGGGT GGATCGTCGC GGCCGGTTGT GGCGGCTGCT
GCCGCCGGGC CGGTCGCCCA GGCGGTGCCT GCTGTGCGTG CGGAACGGGT GGTCGATGCA
CCGCGCGCGA CGTATCAAGC CGATCCGCCG GCCGCCGCCG CACCGGCTGC AGCGCCTGCC
CCAGCAACCC CGGCCCCGGC CAGTGCGCCG GCCCGCCGTT CACCGGCGCT GGAAGCGCTG
GCCGCGGCGC GCCAGGCGTC GAGCCGGGGG GCGCGCGGCG GTGCCGCGGC GCCGGCTTCC
GCGCCTGCCC CCGTGCCGGC GCCGGCCGCA CGCCCGGCCG CGGCCGGTCC GCGCTCGAAT
CCGGCGGCTG CGCCTGCGTC GCCGCCGGTG CGCCGTGAAC CGGCTGCCGC GTCCGCGCCT
GCCGACGACT TTGCCCCGCC GCCCTGGGAG GAGATGCCCG ACGAGTTCGC TTCGCCGTCT
CCCGATCAGA TCGACGCCGC GTTTGCCGGC TGGGAGGCGG CTTCGACCAC GCGCCCGGGC
GCGCAGGCTG CGGCCGCGCG CCCTGCGCAG AGTGAGCCGC CCGCCGCGGC GCCGGTGCCG
GCCAGGGCTG CCGCACCGGA GCCGGTGGTC GCCGCCACGC CGCCCGACCT GAGCGCCAGC
GGTCTGACGG CCTTCGACGG CGACTGGCCC ACGCTTGCGG CACGTCTGCC GCTGCGCGGC
TTGGCGCAGC AGCTGGCGCA CCAGAGCGAG CTGGTCGCCG TGGAGGGCGC GACGGTACGC
TTGCGCGTCC CGCTGCCGGC ACTGACCGAG GCAAGCGTGC TCGAACGGCT GGAGGCGGCG
CTGACGGAGC ACTTCGGCAC GCCGGTCCGC GTGGTCTGCG ACATCGGTGC CGTCCGGGCC
ACGGCCGCCG CCGCCGATGC CGAGCAGCGT GCCCAGCGCC AGCGCGACGC CGAGGACGCC
ATCGCTGCCG ATCCGTTCGT GCAGGCGCTG GTGCGGGACT TTGCCGCGAC CGTCGTGCCC
GGCTCGATCC AGCCGCACGC GCACTGA
 
Protein sequence
MSYQVLARKW RPRDFTTLVG QEHVVKALTH ALEQQRLHHA YLFTGTRGVG KTTLSRILAK 
SLNCIGTDGQ GGITAQPCGV CRACTEIDAG RFVDYIEMDA ASNRGVDEMA QLLDRAVYAP
TAGRFKVYMI DEVHMLTNHA FNAMLKTLEE PPEHVKFILA TTDPQKIPVT VLSRCLQFNL
KQMPPGHIVS HLDRILGEEG IAHEPNALRL LASAAQGSMR DALSLTDQAI AYSAGEVTEA
AVRGMLGAID QSYLVRLLDA LADENGATLI GIADEMAGRS LSFSGALQDL ASLLQKIALA
QVVPAAVQDD WPEADDIRRL AERFDAQSVQ LFYQFANLGR NELALAPDEY AGFTMTLLRM
LAFQPGQSGG DAPPPSGSGK RAVPSAGVQG GSSRPVVAAA AAGPVAQAVP AVRAERVVDA
PRATYQADPP AAAAPAAAPA PATPAPASAP ARRSPALEAL AAARQASSRG ARGGAAAPAS
APAPVPAPAA RPAAAGPRSN PAAAPASPPV RREPAAASAP ADDFAPPPWE EMPDEFASPS
PDQIDAAFAG WEAASTTRPG AQAAAARPAQ SEPPAAAPVP ARAAAPEPVV AATPPDLSAS
GLTAFDGDWP TLAARLPLRG LAQQLAHQSE LVAVEGATVR LRVPLPALTE ASVLERLEAA
LTEHFGTPVR VVCDIGAVRA TAAAADAEQR AQRQRDAEDA IAADPFVQAL VRDFAATVVP
GSIQPHAH