| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1188 |
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| Symbol | trxA |
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| ID | 1220010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1252542 |
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| End bp | 1252868 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637237564 |
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| Product | thioredoxin 1 (redox factor) protein |
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| Protein accession | NP_519309 |
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| Protein GI | 17545907 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.945237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.545287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAC AGATCAAGTA TGTGAGCGAC GCGTCCTTCG AAGCCGACGT GCTCAAGTCC
GACAAACCCG TGCTCGTCGA TTTCTGGGCG GAGTGGTGCG GCCCCTGCAA GATGATCGCC
CCGATCCTCG ACGAGGTCTC GAAGGACTAC GGCGACAAGG TGCAGATCGC CAAGCTCAAC
GTCGATGAGA ACGCAGGCGT GCCGGCCAAG TTCGGCATTC GCGGCATCCC GACGCTGATC
CTGTTCAAGA ACGGCGCCGT GGCTGCGCAG AAGGTGGGCG CGCTGTCCAA GTCGCAGCTG
ACCGCCTTCC TGGACAGCCA CCTCTAA
|
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| Protein sequence | MSEQIKYVSD ASFEADVLKS DKPVLVDFWA EWCGPCKMIA PILDEVSKDY GDKVQIAKLN
VDENAGVPAK FGIRGIPTLI LFKNGAVAAQ KVGALSKSQL TAFLDSHL
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