| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1187 |
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| Symbol | rho |
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| ID | 1220009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1251086 |
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| End bp | 1252348 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637237563 |
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| Product | transcription termination factor Rho |
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| Protein accession | NP_519308 |
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| Protein GI | 17545906 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.386655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.481707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTGA CAGAACTGAA ATCCCTGCAT GTGTCCCAAT TGCTGGAAAT GGCGGGACAG
CTGGAGATCG ACAACGCGCA GCGCATGCGC AAACAGGAGC TGATGTTTGC CATCCTGAAA
AAGAAAGCGA AACAGGGGGA AACGATTTTC GGCGACGGCA CGCTGGAAGT GCTGCCCGAC
GGCTTCGGCT TTCTGCGCTC GCCGGAAACG TCGTACCTGG CGAGCACGGA CGACATCTAC
ATCAGCCCGT CGCAGATCCG CCGCTTCAAC CTGCACACCG GCGACACCAT CGAAGGCGAA
GTCCGCACGC CCAAGGACGG CGAGCGTTAC TTCGCGCTGG TGAAGGTCGA CAAGGTCAAC
GCCCAGCCTC CTGAAGCGGT CAAGAACCGC ATCATGTTCG AGAACCTGAC GCCGCTGCAT
CCGAACCGCA CGCTCACGCT CGAACGCGAC ATCAAGGCCG AGGAGAACAT CACCGGCCGC
ATCATCGACA TGATCGCCCC GATCGGCCGC GGCCAGCGCG CGCTGCTGGT GGCCTCGCCC
AAGTCGGGCA AGACCGTGAT GCTGCAGCAC ATCGCGCATG CCATCACGGC CAACCATCCG
GAAGCCGAAC TGTTCGTGCT GCTGATCGAC GAGCGTCCGG AAGAAGTGAC CGAGATGCAG
CGCACCGTGC GCGGCGAAGT GGTGGCCTCC ACCTTCGACG AGCCGGCCGT GCGCCACGTG
CAGGTCGCGG AAATGGTGAT CGAGAAGGCC AAGCGCCTGG TTGAACTGAA GAAGGACGTG
GTGATCGTGC TGGACTCGAT CACGCGCCTG GCCCGCGCCT ACAACACCGT GGTGCCGACC
TCCGGCAAGG TGCTGACCGG CGGCGTGGAC GCCAACGCCC TGCAGCGTCC GAAGCGCTTC
TTCGGTGCCG CGCGCAATCT GGAGGAAGGC GGTTCGCTGA CCATCATCGG CACGGCGCTG
ATCGAAACCG GCAGCCGCAT GGACGACGTG ATCTACGAAG AATTCAAGGG CACCGGCAAC
ATGGAAGTGC ACCTGGAGCG CCGCCTGGCC GAGAAGCGCG TCTACCCCGC CATCAACCTG
AACAAGTCGG GCACGCGCCG CGAAGAGCTG CTGATCAAGC CGGACATCCT GCAGAAGGTG
TGGATCCTGC GCAAGTTCAT CCACGATATG GACGAGGTCG AGGCGATGGA ATTCCTGCTC
GACAAGCTCA AGTCCACGAA GAACAACGCG GAGTTCTTCG ACATGATGCG ACGTGGCAGC
TGA
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| Protein sequence | MHLTELKSLH VSQLLEMAGQ LEIDNAQRMR KQELMFAILK KKAKQGETIF GDGTLEVLPD
GFGFLRSPET SYLASTDDIY ISPSQIRRFN LHTGDTIEGE VRTPKDGERY FALVKVDKVN
AQPPEAVKNR IMFENLTPLH PNRTLTLERD IKAEENITGR IIDMIAPIGR GQRALLVASP
KSGKTVMLQH IAHAITANHP EAELFVLLID ERPEEVTEMQ RTVRGEVVAS TFDEPAVRHV
QVAEMVIEKA KRLVELKKDV VIVLDSITRL ARAYNTVVPT SGKVLTGGVD ANALQRPKRF
FGAARNLEEG GSLTIIGTAL IETGSRMDDV IYEEFKGTGN MEVHLERRLA EKRVYPAINL
NKSGTRREEL LIKPDILQKV WILRKFIHDM DEVEAMEFLL DKLKSTKNNA EFFDMMRRGS
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