| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1186 |
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| Symbol | |
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| ID | 1220008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1249454 |
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| End bp | 1250830 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237562 |
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| Product | putative sigma-54 interacting transcription regulator protein |
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| Protein accession | NP_519307 |
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| Protein GI | 17545905 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.105927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.32993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAAG AGCCGCTGGA ATGTACAAGT GCGTGCCGAA CCGTTGTGGT TGCGTCACGC
ACCGGCATGG GGGAGATCAG CGAGACGATC CTGGGCGCGG ATTGGCATGT CAGGCACGTC
AACTCGGTGC GCGAACTCGG ATGCGCCATC CGTGACGGCG TGCCGAAAGC CGGGCTGATC
GACTTCGGCA GCGCGTTCTC GTCCGCTGAG CTGGATCTGC TCGAGCGCTG CCTGCAGGTT
TCGCACGTGG GCTGGGTGGC CGCGCTGCCG CAGGCCATGC TGAGCCATGA GCGCGTACGC
CAATTGGTGC GCGACTATTG CGTCGACTAC GTCCAGATGC CGCTGCGCAT CGAGGAAGCC
GGGTACTCGC TGCGGCATGC ATGGGGCATG GCCACGCTGG CGCAGGAGGC CCCCGCGCCC
AAGATCAGCA ATGCCCGCAT GCTCGGCGAA TGTTCAGCCA TGCAGAGCCT GTTCCGGGCG
ATCCGCAAGG TCGCGCAGAA CAGCGCGCCC GCCTTCATCG CCGGCGAATC GGGCACCGGC
AAGGAACTGA CGGCCCAGGC CATCCACGAG GCCTCGGCGC GCGCGGGCGG TCCCTTCATC
GCCATCAACT GCGGCGCCAT CCCGCCGCAC CTGATCCAGT CCGAGCTGTT CGGCTACGAG
AAAGGCGCCT TCACCGGCGC GCACCAGCGC CATATCGGCT GGGTCGAGCA CGCCAACGGC
GGCACGCTGT TCCTCGATGA GATCGGCGAC CTGCCGCTGG AGAGCCAGGT GAGCCTGCTG
CGCTTCCTGC AGCAAGGCAC CATCACGCGG CTGGGCGGGC ACCAGGCGAT TCCGCTCGAC
CTGCGCATCA TCTCCGCCAC GCACGTGGAC CTGGAGGCCG CGCAGCATCA CGGCGGCTTC
CGCACCGACC TGTTCCACCG GCTGTGCGTG CTGACGCTGT CGGTGCCGCC GCTGCGCGAG
CGCGGCAGCG ATATCGTGCT GCTGGCCGAG CATATCCTGG CCCAGCACGC CAACGAGGCC
TCGCACCGCA TTCGCGGCTT CACGCCCTGC GCGCTGCACG CGATGATGCA CTACCCGTGG
CCGGGCAACG TGCGCGAGCT GATCAACCGC GTCCGCCGCG CGCTGGTGAT GACGGACAAC
CGCAAGATCT CCGCCTCCGA CCTGCACCTG GAAGGCTACG CATCGATCTC CGGCCAGACG
CTGGAAGAAG CGCGCGAAGG CGCGGAATCC GATGCGATCC GCACCGCCAT CGCCCGCAAC
GGCTTCCATA TGGGCATGAC GGCGCGCGAG CTGGCGGTGT CCCGCGTGAC GCTGTACCGG
CTGATGCAGA AGCACGGCAT CCGCGCCGAA CACCCCCTGC ATCATCCGGT TTCGTAG
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| Protein sequence | MREEPLECTS ACRTVVVASR TGMGEISETI LGADWHVRHV NSVRELGCAI RDGVPKAGLI
DFGSAFSSAE LDLLERCLQV SHVGWVAALP QAMLSHERVR QLVRDYCVDY VQMPLRIEEA
GYSLRHAWGM ATLAQEAPAP KISNARMLGE CSAMQSLFRA IRKVAQNSAP AFIAGESGTG
KELTAQAIHE ASARAGGPFI AINCGAIPPH LIQSELFGYE KGAFTGAHQR HIGWVEHANG
GTLFLDEIGD LPLESQVSLL RFLQQGTITR LGGHQAIPLD LRIISATHVD LEAAQHHGGF
RTDLFHRLCV LTLSVPPLRE RGSDIVLLAE HILAQHANEA SHRIRGFTPC ALHAMMHYPW
PGNVRELINR VRRALVMTDN RKISASDLHL EGYASISGQT LEEAREGAES DAIRTAIARN
GFHMGMTARE LAVSRVTLYR LMQKHGIRAE HPLHHPVS
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