| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1178 |
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| Symbol | |
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| ID | 1219994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1238931 |
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| End bp | 1239890 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237548 |
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| Product | lipoprotein transmembrane |
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| Protein accession | NP_519299 |
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| Protein GI | 17545897 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0068369 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.214637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCC GTCTCTTCCT GGGCGCCGCC GGCGCCTCCC TGCTCTCCGC CTGTACCGTC
ACGGGCTTCT CATCGTCGTC GGGCAGCAAG AACGCCCCCG CGCTGGCCAC GGCGGTCGTG
CCGCCCGAAT CGCAGCCGGC CGTGCCACCG GTGCGCATCG GCCTGGCGCT GGGCGGCGGC
GCCGCGCGCG GCTTCGCGCA CATCGGCGTG ATCAAGGCGC TGGAAGCCCA GGGCATCCAG
ATCGATTTCA TCACGGGCAC CAGCGCAGGC AGCGTGGTGG CGGCCCTCTA CGCGTCGGGC
ATGTCGGGCA TCGAACTGAA CCGGCAGGCG CTGAAGATGG ACGAGGCGAC GATCGCGGAC
TGGGCGCTGC CCTTCGGCAC GCGCTTCGGC GGCTGGCTCA AGGGCGAGGC GCTGGAGAAA
TACGTCAACC GCCTGGTCAA GCAGAAGACC ATCGAGCAGA TGCGCATTCC GCTGGGCATC
GTCGCCACGG ACCTGGGCAG CGGCAGGCCG ATCCTGTTCC GCCGCGGCAA TACCGGCCAA
GCCGTGCGGG CATCCTGCAG CATCCCGGGC GTGTTCCAGC CGGTGACGAT CAGCGGCCAC
CAATACGTGG ACGGCGGCCT GGTGGCGCCG GTGCCCGTCA CCTACGCCAA GCAGATGGGG
GCGACCTTCG TGATCGCGGT GAACATCTCG GCGGACCCGT CGGCGCAGGC GGTGTCCGGC
CAGGCCAGCA TGCTGCTGCA GACCACGACG ATCATGGGCC AGAGCATCAA CAAGACGGAA
CTGGCGCAGG CGGACGTGGT GATCGCCCCG TCGCTGCCGT TCGTCAAGGG CAGCGATTTC
ACGGCACGCA ACGAAGCCAT CCTCGGCGGC GAACAGGCCG CCCTGGCGGC CATGCCGCTG
CTGCGCGAAA AGCTGCGCCT GCCGCAGACG GCCCAGGCCA CGCCGCTGCC GCCGCATTGA
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| Protein sequence | MQRRLFLGAA GASLLSACTV TGFSSSSGSK NAPALATAVV PPESQPAVPP VRIGLALGGG
AARGFAHIGV IKALEAQGIQ IDFITGTSAG SVVAALYASG MSGIELNRQA LKMDEATIAD
WALPFGTRFG GWLKGEALEK YVNRLVKQKT IEQMRIPLGI VATDLGSGRP ILFRRGNTGQ
AVRASCSIPG VFQPVTISGH QYVDGGLVAP VPVTYAKQMG ATFVIAVNIS ADPSAQAVSG
QASMLLQTTT IMGQSINKTE LAQADVVIAP SLPFVKGSDF TARNEAILGG EQAALAAMPL
LREKLRLPQT AQATPLPPH
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